Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0022 ATGGCGGCGAAGCTACGGTGGGGAGAATTGGAAGAAGACGACGGTGAAGATTTGGATTTCCTTTTGCCGCCGAAGCAGGTGATTGGTCCAGATGATAATGGCATAAAGAAAGTTATCGAGTACAAATTCGATGATGAAGGGAACAAGGTTAAGATCACTACTACCACTCGCACACGCAAACTAGCCAACGCGCGTCTCAGTAAACGCGCCATCCAACGCCGTTCTTGGCCAAAGTTCGGTGACGCCGTTCATGAGGATGTCGGCAGCCGCCTCACCATGGTCTCCACCGAAGAGATCCTCCTCGAACGTCCCAAGCCTCTAGGTGCAAAAGCAGAGGAGCCACGGGCTGCTGGAGACCTATTTCAGAGAGGTGCTGTTCTTATGGTCTGTAGGACTTGTGGGAAGAAGGGTGACCATTGGACTTCAAAGTGTCCGTACAAGGATCTTGCCCCACCATCTGAAGGATTTGTCGATAAGCCTCCAGCATCTGATGCTGCAACTGCTGCGGCCGGTGCAACCAAGGGATCATATGTGCCTCCTAGCATGAGAGCAGGTGCTGAGAGGACTACTGGATCAGACATGCGCCGAAGGAATGATGAGAACTCTGTAAGGGTCACCAACCTCTCAGAGGACACAAGAGAACCTGACTTGCTTGAGCTGTTCCGTCCTTTTGGTGCTGTGAGCAGAGTGTATGTTGCTATTGACCAGAAGACCGGCATGAGCAGGGGATTTGGCTTTGTTAACTTTGTAAGCAGGGAAGAGGCACAAAGAGCTATCAACAAACTCAATGGATACGGCTACGACAATCTCATCCTCAGGGTTGAATGGGCCACCCCAAGGACAAACTAA 849 0.5124 MAAKLRWGELEEDDGEDLDFLLPPKQVIGPDDNGIKKVIEYKFDDEGNKVKITTTTRTRKLANARLSKRAIQRRSWPKFGDAVHEDVGSRLTMVSTEEILLERPKPLGAKAEEPRAAGDLFQRGAVLMVCRTCGKKGDHWTSKCPYKDLAPPSEGFVDKPPASDAATAAAGATKGSYVPPSMRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVSREEAQRAINKLNGYGYDNLILRVEWATPRTN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0022 282 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 4 282 - -
Lal23g0022 282 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 203 269 IPR000504 GO:0003723
Lal23g0022 282 CDD RRM_eIF3G_like 202 277 IPR034240 -
Lal23g0022 282 CDD eIF3G 33 148 IPR024675 -
Lal23g0022 282 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 4 282 - -
Lal23g0022 282 PIRSF Transl_init_eIF-3_RNA-bind 1 282 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lal23g0022 282 SMART rrm1_1 202 275 IPR000504 GO:0003723
Lal23g0022 282 SUPERFAMILY RNA-binding domain, RBD 189 281 IPR035979 GO:0003676
Lal23g0022 282 Gene3D - 161 282 IPR012677 -
Lal23g0022 282 Pfam Eukaryotic translation initiation factor 3 subunit G 26 149 IPR024675 -
Lal23g0022 282 MobiDBLite consensus disorder prediction 155 201 - -
Lal23g0022 282 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 201 279 IPR000504 GO:0003723
Lal23g0022 282 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 4 281 IPR017334 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0022 Lal-Chr23 204045 205695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0022 3 280 Eukaryotic Initiation Factors Gene Family AT3G11400 69.872 4.66e-154 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0022 K03248 - gmx:100818725 498.819