Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1414 ATGGGTAGTTGTAGTTGGAAATACAAGTTCCTTATTGGAGTTTTATCTGTTTTGTGTTTGACATGGGTTTCATCAGGAGAGGGAGATGATGAAAACAACATGATTCTCATTGATTGTGGATCAACCAATGATACTTTGGTGGCAGGGCGTCGCTTATTTCTTGCTGATAATGATAATAACAATAATGTTTCCACCTCTTCTGAGTTTATTTTGGCTAAGGCAAACTTCACCACTATTCCATCTTCATCATCTTTTGATTCACAATTGTACCACACTGCTCGAATCCTTACCACTCTTTCTCAATACACATTTCCAATCAAAACACATGGAAGACACTGGATTCGCTTGTATTTCTTCCCTTTCACTTTTCAAACTTATAATTTAAGCACTGCAAAATTCTCTGTTTCTGCTCAAACCACCACACTGCTCAAAGACTTCCAAATACAAAGTGGCTCTTCACTCAGAGAATACTCTTTGAATATAACCATTGACCACCTTGTCCTCACTTTCACCCCATCTTCTAATTCATTTGCATTCATAAATGCAATAGAAATTTTATCAATCCCTGACAAGGTTATTGCTAAGAATGTTAGCATTGTGAGGCCACAAGGGAATGGTGGTGATGTCTGGACAAAGGCATTGGAAACTGTTGCTAGGGTTAATATGGGTAATCAAAGTGTATCTCCACTTAATGACACTTTGTGGCGTCTATGGCTCTCAGATGATAGATATCTTATACACAATAATCTTGTACATTTTGTATCTAATGTTTCTGCAGTCAATTTCAAAGAAACAAACATGAGTCAAGATATTGCCCCATCAAAGGTATATGGTACTGCAACTAGATTGAGTACAGGTTCAGATCCTAGAACAAATGCAAATGTTACATGGCATTTTGATCTTGATCCTGGCTTTGATTATCTGGTTCGCTTTCACTTCTGTGACATTGTAAATCTACCCGCAAATAGTCTCTTCAATGTTTATGTTAACTCTTGGCTTGTTTCTACACTCGATCTTCACAAAGAAACCTCAAATAAATTTGGTGCACCATTTTACATGGATGCCATCACAAGGGCTAGTAGTGGCAGCCGTAGTTTCAATGTCACTGTTGGTACTTACAGTATAAGTGAAGCATCTTCCCCAGAGGCCATTCTCAATGGGCTAGAGATAATGAAACTGAGTAACTCTAAAAATAGCCTGGTATTTGATTCAGACTCAGGCAAGAGTACCAAGACAAAGGTTGGTATTATAGTGGGTATAGTGACTGGATCTGTCGTTGGTTTTATGGCTATTATGGTTATGGCTTTATTTCTGCTTTGCAGAAGAAGAAGAAGAAACAGTATTGACGTTGGTATGAGCAAAGAGGCTGGTAACACTTACGATGGAACTGCAATATTTTCAAGCTCAAAAATTGGGTATTGGTTTCCTCTTGCAGTAATTCAAGAGGCAACTAATAATTTCAGCGAAGATTTAGTCATTGGTAGTGGTGGTTTTGGGAAGGTTTACAAGGGAGTTTTGAAAGATGAAACAAAGGTAGCTGTGAAAAGAGGGACATCTCAATCTCAACAAGGTCTTGCTGAGTTTAGGACTGAAATTGAGATGTTATCACAGTTTCGTCATCGCCATTTAGTATCATTGATCGGGTACTGTAATGAACAGAACGAGAGGATCATTATTTATGAGTACATGGAAAAAGGGAGCCTGAAGAACCATCTCTTCTCTGGATCACCTTGCTTAAGTTGGAAGCAGAGGCTTGAGATTTGCATAGGAGCAGCCAGAGGACTACATTATCTTCACACTGGCTCTGCCAAGTCAATTATTCACCGTGATGTCAAATCTGCTAATATCCTGCTAGATGATAACTTGGTGGCCAAGGTTGCTGACTTTGGTCTTTCAAAGACTGGTCCAGAGATTGATAAGACGCATGTTAGTACAGCAGTGAAAGGAAGCTTTGGCTATCTTGATCCAGAATACTTAATAATGCAGCAACTCACCGAAAAATCAGATGTATACTCTTTTGGGGTGGTCATGTTTGAAGTCCTTTGTGGAAGACCAGTAATTGATCCATCACTGCCTCGGGAGAAGGTGAATCTGCTGGAATGGATAATGAAATGGCAGCAGGAGAGAAACACATTGATAGAGGAAATAGTAGATCCTTGCCTACTTGCAGTTTCAGGTAATCAGACAAAGTTAGAGTCGGTCCAGAAACTCGTAGAGATTGCCAAAAAATGCTTGTCAGAAAATGGCATCAATCGACCTACCATGGGAGATGTGTTGTGGCACTTGGAGTATGCTCTGCAACTTGAAGCTATTGGTGAGAGATCCAATCATGTTGGTGATGAGTCCCCCTCACAAGTGTATCATCACTCCAACACTAGATTATCTTCCATGGAACGCAGTATGGGAAGCATAGCTGACTTGTCTGGTGTATCAATGAGCAAGGTGTTTGCCCAAATGGTGAAAGAGGATATGCAGTAG 2478 0.3987 MGSCSWKYKFLIGVLSVLCLTWVSSGEGDDENNMILIDCGSTNDTLVAGRRLFLADNDNNNNVSTSSEFILAKANFTTIPSSSSFDSQLYHTARILTTLSQYTFPIKTHGRHWIRLYFFPFTFQTYNLSTAKFSVSAQTTTLLKDFQIQSGSSLREYSLNITIDHLVLTFTPSSNSFAFINAIEILSIPDKVIAKNVSIVRPQGNGGDVWTKALETVARVNMGNQSVSPLNDTLWRLWLSDDRYLIHNNLVHFVSNVSAVNFKETNMSQDIAPSKVYGTATRLSTGSDPRTNANVTWHFDLDPGFDYLVRFHFCDIVNLPANSLFNVYVNSWLVSTLDLHKETSNKFGAPFYMDAITRASSGSRSFNVTVGTYSISEASSPEAILNGLEIMKLSNSKNSLVFDSDSGKSTKTKVGIIVGIVTGSVVGFMAIMVMALFLLCRRRRRNSIDVGMSKEAGNTYDGTAIFSSSKIGYWFPLAVIQEATNNFSEDLVIGSGGFGKVYKGVLKDETKVAVKRGTSQSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCNEQNERIIIYEYMEKGSLKNHLFSGSPCLSWKQRLEICIGAARGLHYLHTGSAKSIIHRDVKSANILLDDNLVAKVADFGLSKTGPEIDKTHVSTAVKGSFGYLDPEYLIMQQLTEKSDVYSFGVVMFEVLCGRPVIDPSLPREKVNLLEWIMKWQQERNTLIEEIVDPCLLAVSGNQTKLESVQKLVEIAKKCLSENGINRPTMGDVLWHLEYALQLEAIGERSNHVGDESPSQVYHHSNTRLSSMERSMGSIADLSGVSMSKVFAQMVKEDMQ 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1414 825 Pfam Protein tyrosine and serine/threonine kinase 492 759 IPR001245 GO:0004672|GO:0006468
Lal22g1414 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Lal22g1414 825 Gene3D Phosphorylase Kinase; domain 1 451 562 - -
Lal22g1414 825 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 32 817 - -
Lal22g1414 825 Gene3D - 212 395 - -
Lal22g1414 825 Gene3D - 30 188 - -
Lal22g1414 825 Gene3D Transferase(Phosphotransferase) domain 1 563 781 - -
Lal22g1414 825 SMART serkin_6 487 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g1414 825 CDD STKc_IRAK 493 763 - -
Lal22g1414 825 SUPERFAMILY Protein kinase-like (PK-like) 475 775 IPR011009 -
Lal22g1414 825 PANTHER OS07G0166700 PROTEIN 32 817 IPR045272 GO:0004714|GO:0006468
Lal22g1414 825 PIRSF SRK 354 814 IPR024171 GO:0004674
Lal22g1414 825 PIRSF SRK 42 172 IPR024171 GO:0004674
Lal22g1414 825 ProSiteProfiles Protein kinase domain profile. 487 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g1414 825 Pfam Malectin-like domain 37 392 IPR024788 -
Lal22g1414 825 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1414 Lal-Chr22 17013591 17016068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1414 11 825 Receptor kinase-like Gene Family AT2G39360 50.536 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal22g1414 Malectin_like 1.4e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1414 - - lang:109328391 1474.53