Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1412 ATGGAGAAGGTTGGGATGAGATTACCACCTGGGTTCCGTTTTCACCCAACTGATGAGGAATTGATTGTCCAATACTTGAAGCCTAAGCTCTTCTCTTTCCCTTTCCATTCTTCTATCATTCCCGACCTTCTTCTTTCTAACTCTGACCCTTGGGATTTACCAGGTGATTTGGAGAAAGAGATGTACTTCTTCATGAGTAAGGAAGCCAAATATCCTAATGGCAACAGATCCAACAGAGCTACTAATTCTGGTTACTGGAAGGCAACTGGGTTAGACAAACAAATTATGACTTCAAAAGGGAATAACAAACAAATTGTGGGAATGAAAAAGACTCTTGTTTTCTATAGAGCCAAATCACCTCATCATGCTTCAAAGACTGATTGGATTATGCATGAATATCGTCTTCTTACCAACACTCATTCTCACTCTCAGAGTGGTGTTGTTCCTTTAGAAAATTGGGTTCTATGTAGGATATTTTTAAAGAAGAGAGGTGTTAAAAAAGTGGAGGATACAAATATAGACAAGTTTATCCCCAACAACAAGTCTAAGGTTAGGAAGACTAATTCAAAGGTGGTTTTCTATGAATTCTTGGCACAAAACGACAACAACAACAACATGAGTTCCTCATCCTCGGATGGCAGTGGAATCACAGAGATTTCAAGTTCAACCAATGAATTAGATAAACAACATGAAGAGAACAGTTCTAGTTATTCTAGGAGAGAAGAACCTTAA 732 0.3825 MEKVGMRLPPGFRFHPTDEELIVQYLKPKLFSFPFHSSIIPDLLLSNSDPWDLPGDLEKEMYFFMSKEAKYPNGNRSNRATNSGYWKATGLDKQIMTSKGNNKQIVGMKKTLVFYRAKSPHHASKTDWIMHEYRLLTNTHSHSQSGVVPLENWVLCRIFLKKRGVKKVEDTNIDKFIPNNKSKVRKTNSKVVFYEFLAQNDNNNNMSSSSSDGSGITEISSSTNELDKQHEENSSSYSRREEP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1412 243 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 238 - -
Lal22g1412 243 MobiDBLite consensus disorder prediction 224 243 - -
Lal22g1412 243 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 4 238 - -
Lal22g1412 243 ProSiteProfiles NAC domain profile. 8 161 IPR003441 GO:0003677|GO:0006355
Lal22g1412 243 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Lal22g1412 243 MobiDBLite consensus disorder prediction 203 243 - -
Lal22g1412 243 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Lal22g1412 243 Gene3D NAC domain 17 167 IPR036093 GO:0003677|GO:0006355
Lal22g1412 243 MobiDBLite consensus disorder prediction 203 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1412 Lal-Chr22 16969104 16970501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1412 6 167 NAC Transcription Factor Family AT5G13180 67.901 3.69e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal22g1412 NAM 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1412 - - lang:109327549 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0678 18 5886331 5887984 Lal22g1412 22 16969104 16970501 LSH