Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1408 ATGGGTTGTTTTTCATGTTTTGAATCGTTGGAAGATGAGAAACTCAATACTCATTCTGAGCAGCACTATCAACAACAACAATCCAATCATCATAATCATAATCTTCCCAAACACCAACCTCGTACTCCTCCTCATATTCCCAGAATCCCCTCTGATAAATTTCAATCTCGAATTAATCGGGATTTGAAAAAGGAAGAGCCTGCTTCCAATGGTATTCATATACCTGGTGTCCACATTGCTGCTCAAACTTTTACTTTCCGTGAACTTGCAGCCGCCACTAAAAACTTTAGGCCAGAGTCCTTTATAGGGGAAGGTGGTTTTGGATGTGTCTATAAAGGGTGGCTGGAAAGCACTGCTCAGACTGTTGCTGTTAAACAGTTAGACAGAAATGGTCTTCAGGGTAATCGTGAATTCCTTGTCGAGGTTCTCATGCTCAGCCTTTTACATCACACTAATCTTGTCAATCTCATTGGATACTGTGCCGATGGGGACCAACGCCTTCTTGTATATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCACGACCTTCCTCCTGGTAAGGAACCACTAGATTGGAATACTAGGATGAAAATAGCTGCTGGTGCTGCAAAAGGATTAGAATACCTGCATGACAAAGCAAATCCTCCTGTCATTTATAGGGACTTAAAGTCGGCTAATATATTACTTGATGAAGGATTTCACCCAAAGCTTTCTGATTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAGTCCCATGTTTCTACCCGTGTCATGGGAACTTATGGTTATTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTGAAATCTGATGTATATAGTTTTGGTGTCGTCTTGTTAGAGCTGATTACTGGCCGGAAAGCAATTGATAACAACCAACCCCATGGAGAACAAAATCTTGTCTCATGGGCATGTCCGCTGATTAACGACCGCAGGAAGTTATCAAAGTTGGCTGATCCAAAGCTGCAAGGACGGTTGCCCATGCGAGGTCTTTATCAGGCTCTTGCTGTGGCATCGATGTGTATCCAAGAATCGGCTGCCGCACGCCCTCTGATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGCTAACCAGGCATATGACCCTAAGGGATCCAGTAGCGATGATAAAAGGAATAAAGAGGATAAAGGCGGACGAATATTGAAGAATGAAGAAGCTGGAGGATCTGGACCGAGATGGGACTTGGAAGGATCTGAGAAAGATGACTCCCCACGAGAAACTGCAAGGATGTCAGATAGAGAACGTGCCGTGGCTGAAGCCAAGTTGTGGGGAGAGAACTTGAGAGAAAAAAGGCGACAAAACGCATCACCAGGCAATTTTGATGAATCTAATGCCTAG 1392 0.4432 MGCFSCFESLEDEKLNTHSEQHYQQQQSNHHNHNLPKHQPRTPPHIPRIPSDKFQSRINRDLKKEEPASNGIHIPGVHIAAQTFTFRELAAATKNFRPESFIGEGGFGCVYKGWLESTAQTVAVKQLDRNGLQGNREFLVEVLMLSLLHHTNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPGKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSANILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVLLELITGRKAIDNNQPHGEQNLVSWACPLINDRRKLSKLADPKLQGRLPMRGLYQALAVASMCIQESAAARPLIGDVVTALSYLANQAYDPKGSSSDDKRNKEDKGGRILKNEEAGGSGPRWDLEGSEKDDSPRETARMSDRERAVAEAKLWGENLREKRRQNASPGNFDESNA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1408 463 SUPERFAMILY Protein kinase-like (PK-like) 72 370 IPR011009 -
Lal22g1408 463 PANTHER OS07G0668900 PROTEIN 1 456 - -
Lal22g1408 463 Pfam Protein kinase domain 99 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g1408 463 Gene3D Phosphorylase Kinase; domain 1 80 172 - -
Lal22g1408 463 MobiDBLite consensus disorder prediction 382 400 - -
Lal22g1408 463 ProSiteProfiles Protein kinase domain profile. 96 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g1408 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lal22g1408 463 Gene3D Transferase(Phosphotransferase) domain 1 173 397 - -
Lal22g1408 463 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Lal22g1408 463 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 456 - -
Lal22g1408 463 MobiDBLite consensus disorder prediction 16 51 - -
Lal22g1408 463 MobiDBLite consensus disorder prediction 377 463 - -
Lal22g1408 463 MobiDBLite consensus disorder prediction 412 454 - -
Lal22g1408 463 SMART serkin_6 96 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g1408 463 CDD STKc_IRAK 102 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1408 Lal-Chr22 16928666 16932844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1408 1 450 Glycoside Hydrolase AT3G07070 57.428 6.44e-168 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal22g1408 Pkinase 4.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1408 K13430 - qsu:112033137 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0677 18 5867171 5872698 Lal22g1408 22 16928666 16932844 LSH