Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1402 ATGTGCCGTTGGATGAAATTATTGGATGACCTGTTACTTGCCAGTGACCTTTTAGAAGTCGGTTTGGTGGGGGATGACTTCTGTACAGAAGTCGGTTTCGGAGAGTGTGACTTCTATAGAGAAGTCGGTTTGGGGAGGGACGACTTCTATAGAGAAGTCGGTTTGGGGAGGGGCGACTACCTAGAGAAGTCGGTTTGGCAAGACTTTAGATACATATACAAAACAACACTGCAGAGACTTTGGATGGAAGAAGAAATGAACTTGAATCATGAAATACCAGAGGCTGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAGGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAGTAAAGAAATATAGAGAGAGATTTAGGGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAATCGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTCAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTATGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTAGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGCATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAGGAAATGGTGACGCAGAATCAGCATTACAATACTTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACTCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAAAAGTATTTGCTGCTGGTATTGTGTCCAACGAGACAGAGGAAACGTACGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGTTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGATTTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGGCATCTCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTATTCTGGTTTGCATACGACATCACATTGCGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTGATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCTGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTTATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAGATGGCATGTATCACATTATGATAATGGTAGTAATGTGGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTATTTTTGTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAAAACCAGTAGATATGGAGCTTTGATTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAACGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGTTCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAGATCAACTAAGAGACCCAGTTCGAGTGCGTGCTAAAGGGAGAGTACCGGGGATTACCTCAAGGTCCAAGCGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAGGGCAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCAATGAAGAATGA 2262 0.3758 MCRWMKLLDDLLLASDLLEVGLVGDDFCTEVGFGECDFYREVGLGRDDFYREVGLGRGDYLEKSVWQDFRYIYKTTLQRLWMEEEMNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEVKKYRERFRDKKNELVRKRAPRKESRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIGTGKIFSSFAGQSGGYRYIAFSKKDMYNQIQRQRIIGNGDAESALQYLKEQSKSDSAMYWRLIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTKVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCVWHICNNAGKNIKKNNFHKDFQKVMYADVEIDDFNMMWEELIAKHALHNNAWASQIFDCRSMWARSYIRGKFYSGLHTTSHCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVVFKEFREILLEAAKLRIISSQQTSSYVIYKIGKHYNPNKRWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSIFVLLILDISQLPSCLVLERWTKKAKNVEGVNFQQCELSRESVKTSRYGALIDACRVLCNLACETEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNANVDQLRDPVRVRAKGRVPGITSRSKRGNQCGICREIGHNRASCPNIVGSCSRTFDNDFNEE 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1402 753 ProSiteProfiles Zinc finger SWIM-type profile. 564 602 IPR007527 GO:0008270
Lal22g1402 753 Pfam SWIM zinc finger 572 599 IPR007527 GO:0008270
Lal22g1402 753 Pfam FAR1 DNA-binding domain 131 185 IPR004330 -
Lal22g1402 753 PANTHER OS02G0262500 PROTEIN 132 692 - -
Lal22g1402 753 Pfam MULE transposase domain 287 381 IPR018289 -
Lal22g1402 753 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 132 692 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1402 Lal-Chr22 16840672 16843387 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal22g1402 MULE 1.4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1402 - - lang:109350553 639.032