Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1395 ATGGCAGCTGTCAGTTCTTCTCGGGAGGAAAATGTTTACTTGGCAAAGTTGGCAGAGCAAGCAGAGCGTTATGAGGAGATGGTGGAGTTCATGGAGAAGGTTGCAAAGACCGGAAACGGTGAGGAATTAACTGTGGAGGAGAGGAATCTTCTCTCCGTGGCTTACAAGAATGTGATTGGTGCAAGGAGAGCTTCATGGAGGATCATCTCATCCATTGAGCAGAAGGAAGAGAGTAGGGGCAATGAGGATCATGTCACTATCATTAAAGACTATAGGGGAAAGATTGAGGCTGAGCTAAGCAAGATCTGTGATGGGATCTTGAATCTCCTTGAGTCTAATCTCGTCCCATCAGCTACATCCGCTGAGTCTAAAGTGTTTTACCTTAAAATGAAAGGTGATTACCATAGGTACCTTGCTGAATTTAAGACTGGGGCAGAGAGAAAAGAAGCTGCTGAGAGTACTTTGTTGGCATACAAGTCAGCTCAGGATATTGCTCTTGCTGACCTGGCCCCAACTCACCCAATAAGGCTGGGTCTTGCACTCAACTTTTCTGTCTTCTATTATGAAATCCTCAACTCACCAGATCGTGCTTGTAATCTTGCCAAGCAGGCATTTGATGAGGCAATTTCTGAGCTTGACACATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAACTTCTCCGGGACAATCTGACTTTGTGGACGTCTGACATCACGGATGATGCTGGAGATGAGATCAAGGATTCTTCTGAGCAACAATCAGGTGATGGAAAGCAGTGA 789 0.4537 MAAVSSSREENVYLAKLAEQAERYEEMVEFMEKVAKTGNGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTIIKDYRGKIEAELSKICDGILNLLESNLVPSATSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKDSSEQQSGDGKQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1395 262 PIRSF 14-3-3 2 250 IPR000308 -
Lal22g1395 262 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lal22g1395 262 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lal22g1395 262 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lal22g1395 262 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lal22g1395 262 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lal22g1395 262 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lal22g1395 262 SMART 1433_4 8 251 IPR023410 -
Lal22g1395 262 Pfam 14-3-3 protein 14 238 IPR023410 -
Lal22g1395 262 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lal22g1395 262 PANTHER 14-3-3 PROTEIN 5 257 IPR000308 -
Lal22g1395 262 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Lal22g1395 262 Coils Coil 14 34 - -
Lal22g1395 262 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Lal22g1395 262 Gene3D - 1 251 IPR036815 -
Lal22g1395 262 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 257 - -
Lal22g1395 262 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1395 Lal-Chr22 16800692 16804006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1395 4 261 14-3-3 family AT3G02520 89.575 2.55e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1395 K06630 - mnt:112092971 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1395 22 16800692 16804006 Lal22g1395 22 16800692 16804006 ECH