Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1394 ATGGGATTTCGCTTACCCGGTATTAGAAGGGCTTCATTACAAGCAACTTCCAAGGCTGCAGAAGTCCCAAGAGGGTGTCTTGCAGTGTATGTTGGAGAGAAAATGAAGCGATTTGTGATTCCTATTTCATACTTGTCCCAACATTCATTTCAAGAGTTACTAAGCCAAATCGAAGAAGTATTCGGATACGATCATCCAATGGGCGGTCTCACAATTCCTTGCGAGGAAGATGCATTCCTAGACCTCATTTCTGGCTTGAATGGGCTATAA 270 0.4333 MGFRLPGIRRASLQATSKAAEVPRGCLAVYVGEKMKRFVIPISYLSQHSFQELLSQIEEVFGYDHPMGGLTIPCEEDAFLDLISGLNGL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1394 89 Pfam Auxin responsive protein 15 84 IPR003676 GO:0009733
Lal22g1394 89 PANTHER SMALL AUXIN-UP RNA-RELATED 5 86 - -
Lal22g1394 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 5 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1394 Lal-Chr22 16798821 16799090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1394 12 79 Calmodulin-binding Proteins AT5G20810 50.000 1.24e-17 71.6