Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1383 ATGGCAACCTTGCTTATAGCATCATCATATCAAAGTCTCTTCATATTGTTATGTGTTCTTCTAACACTCTCTTCATACCAAGTTACCAGTTTTTCAAAGATTGCATCTTTAGCCACTGCTACTACAAATGAAACAACTTATTCTATAGAGAGTGAAGCAAATGCTCTATTGAAGTGGAAATCTAGTCTTGAAAACAAAAGCCAAGTTCTATTGTCATCATGGACAAGCACTACTACTTCTAGTGTATGCAAATGGGAAGGAATTCTATGTGATAAAACCAAGTCAGTTTATAGCTTAAGTCTTACAAATTATGGACTTAAAGGTACACTTCACACACTCAGTTTCTCTTCATTACCCAACCTCTTAAGCTTAGATCTTAGCAACAACTCTTTTTATGGAACCATTCCTCCACAAATTGGTAACTTAACAAGACTTAGTCATTTGAATATGTCTTACAATTTCTTAAATGGTTCCATTCCTCAAGAAATGTGGACATTGAGGAGTTTATATGCTTTGGATCTAGCTAGATGCAATCTCAGTGGACCAATTCCTATTTCCATAGTAAACTTGGCTAACTTATCACATCTAGATTTTGGAAATAACTATCTAGAAGGCTACATTCCTATAGAAATTGGGAAATTGAGCAACCTTGTTTATCTAGGCATTGCACATAATCCTACCCTTAAGGGTTCCATACCCAAAGAAATTGGAATGTTGACAAAGCTTCAGTTTCTTGATTTGTCAGATAGTGGTCTCTCTGGTACTATTCCTTCTGAAATTGGAAACTTAACCGAGCTAAATCGTCTTTACCTTTTCGGAAATTCTCTCTCTGGGTCAATCCCATCTTCCATATGGAACTTAACTAATTTGTTTGAGCTCAATTTTTACACCAATAAGCTTTCTGGATCAATCCCATCCTCTGTAGGAAACTTAGTCAATTTGACTATCCTTGCACTTGCCGAAAACCATCTTTCTGGAACAATTCCTCCCACTATTGGAAACCTGACACAGCTCAATGTACTGTACTTGGTCACAAATAACTTCTCTGGATCAATTCCTACCTCTATAGGAAATCTGGTCAATTTATATTTGCTCAGCCTTGGAGAAAACAATCTCTCAGGGCCGGTTCCTTCGACCATTGGAAACTTGATACAGCTCAACGACCTGCAATTATTCGGAAACAAACTAAGTGGTAGCCTTCCGCGTGAAATGAATAACCTTACCAACTTGAATAACTTGCAGTTGTCTGACAATAATTTCATTGGTCCTTTGCCACCACAAATCTGCTTAGGTGGGTATTTAGAAACCTTTAGTGCTAATAACAACAAATTTTCTGGTCCAGTACCAACAAGCCTGAAGAACTGCTCTAGTGTCACTAGAATCAGGCTCGATGAAAATCAAATTGAAGGAAATATAACAGAAGATTTCGGTGTCTATCCAAATTTGGACTACATTGATCTCAGTGGAAATAGATTTTATGGTCAAGTTTCTCCAAATTGGGGCAAATGCCCTAAACTTACTAGGCTTATCATCCGAAACAATAATCTTTCTGGTGGTATACCACTAGAACTTGTTAAGGCAACCAAGCTAGGCGCACTTCACCTTTCATCGAATCAGTTGACAGGAAAGCTTCCGAAGGAACTAGGGAATTTGAATTCACTAGTTGAACTCAGGATCAGCAACAATCATATTTCAGGAAACATTCCAACAGAAATAGGATTGCCTCAGAATCTTCAACACTTGGATCTAGCAGGAAACGAGTTCAGTGGCACGATACCAAAAGAGGTGATGGCCTTACCAAATTTGCTGGAACTGAATCTGAGCAACAATAAAATAGAGGGAAGCATTCCCTCTAATATTGGCCAATCTCTTTCATTTCTTGATCTTAGTCACAATTCATTGTCTGGAACAATACCGACAATGCTTGGAGATTTGAAGCACTTGGAAATGTTGAATATCTCACATAATGATCTTTCCGGGACCATTCCATCCAGTTTTGATGATACATTAAGCTTGAATACTGTCAACATATCTTACAATCAGTTAGAAGGGCCAATTCCAAATACTAAAGCCTTTGTTAATGCTTCAATCGATTCATTAAAAACTAACAAAGGCTTATGTGGTAATGTTACTGGCTTATTGCTTTGCTCAACCGATAGCAGTCATAAGAAGAGCCGCAATGTCCTAAAGTTTGTTTTATTTTTTATCTTGGGCCCTCTAGCACTAGTATTTTGTGGGGTGGTAGTTTCAATGTACATTTTTTGTCGACGTAAAGGAAAGAGTGAAATCCAGGCTCAAGAAGCACAGACTGAAGCACACTTTTCCGTATGGAGTTATGATGGAAAAATGATGTTTGAAACTATCATTGAAGCTACAGAGAATTTTGATGACAAGTATCTCATTGGAGTTGGAGGGCAAGGGCGTGTTTACAAGGCTGATTTGCCTGCAGGTCAGGTTGTCGCGGTGAAGAAACTTCATTCGGCAACAGGTGAGGAAATGTCCGGTGTAAAAGCTTTTACAAGTGAGATTCAAACCTTGACAGGAGTCAAGCACAGGAACATTATAAAGCTGTTTGGATTTTGTATGCATTCACAGTTTTCATTTTTGGTCTATGAGTTCTTGGAAGGTGGTAGCTTGGATCAAATACTAAAAGAGGACACACAAGCAACTGCATTTGATTGGGAGAAGAGGGTTAATGTTATTAAGGGTGTTGCCAATGCTTTATCCTATATGCATCATGACTGCTCACCCCCTATAATTCACCGCGATATTTCGAGCAAAAATGTTCTTTTAGATCTCGAATATGAAGCTCATGTTTCTGACTTTGGTACAGCAAAGTTTCTAACTCATGGTTCACAAACTTGGACTGCATTTGCAGGCACCTTCGGGTACGCTGCTCCAGAGCTTGCACAAACAATGGAAGTGAATGAGAAATGTGATGCATACAGTTTTGGAGTACTTGCAATGGAAATCATTATGGGAAAGCATCCAGGAGATTTGATTTCATTGTTCATGTCATCATCAACAGTTCCAATTGCTAATAATCTTCTATTGATTGATACTTTAGACCAAAGAATTCCTCAACCAACAAAAAATCCAATTGTTGGGGAACTTATCTTGATTGCAAAATTGGCACTTACTTGCTTGAGTACAAATCCACATTCTCGCCCAACCATGGAGGAAGTTTCTAAGCAACTTGATAAAGGAAAATCACCTTTACTGGACCAGTTTCATACAATCAGACTTGGACAACTCCACTAA 3261 0.3833 MATLLIASSYQSLFILLCVLLTLSSYQVTSFSKIASLATATTNETTYSIESEANALLKWKSSLENKSQVLLSSWTSTTTSSVCKWEGILCDKTKSVYSLSLTNYGLKGTLHTLSFSSLPNLLSLDLSNNSFYGTIPPQIGNLTRLSHLNMSYNFLNGSIPQEMWTLRSLYALDLARCNLSGPIPISIVNLANLSHLDFGNNYLEGYIPIEIGKLSNLVYLGIAHNPTLKGSIPKEIGMLTKLQFLDLSDSGLSGTIPSEIGNLTELNRLYLFGNSLSGSIPSSIWNLTNLFELNFYTNKLSGSIPSSVGNLVNLTILALAENHLSGTIPPTIGNLTQLNVLYLVTNNFSGSIPTSIGNLVNLYLLSLGENNLSGPVPSTIGNLIQLNDLQLFGNKLSGSLPREMNNLTNLNNLQLSDNNFIGPLPPQICLGGYLETFSANNNKFSGPVPTSLKNCSSVTRIRLDENQIEGNITEDFGVYPNLDYIDLSGNRFYGQVSPNWGKCPKLTRLIIRNNNLSGGIPLELVKATKLGALHLSSNQLTGKLPKELGNLNSLVELRISNNHISGNIPTEIGLPQNLQHLDLAGNEFSGTIPKEVMALPNLLELNLSNNKIEGSIPSNIGQSLSFLDLSHNSLSGTIPTMLGDLKHLEMLNISHNDLSGTIPSSFDDTLSLNTVNISYNQLEGPIPNTKAFVNASIDSLKTNKGLCGNVTGLLLCSTDSSHKKSRNVLKFVLFFILGPLALVFCGVVVSMYIFCRRKGKSEIQAQEAQTEAHFSVWSYDGKMMFETIIEATENFDDKYLIGVGGQGRVYKADLPAGQVVAVKKLHSATGEEMSGVKAFTSEIQTLTGVKHRNIIKLFGFCMHSQFSFLVYEFLEGGSLDQILKEDTQATAFDWEKRVNVIKGVANALSYMHHDCSPPIIHRDISSKNVLLDLEYEAHVSDFGTAKFLTHGSQTWTAFAGTFGYAAPELAQTMEVNEKCDAYSFGVLAMEIIMGKHPGDLISLFMSSSTVPIANNLLLIDTLDQRIPQPTKNPIVGELILIAKLALTCLSTNPHSRPTMEEVSKQLDKGKSPLLDQFHTIRLGQLH 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1383 1086 Pfam Leucine rich repeat 623 682 IPR001611 GO:0005515
Lal22g1383 1086 ProSiteProfiles Leucine-rich repeat profile. 601 623 IPR001611 GO:0005515
Lal22g1383 1086 SUPERFAMILY RNI-like 98 421 - -
Lal22g1383 1086 SMART LRR_typ_2 311 335 IPR003591 -
Lal22g1383 1086 SMART LRR_typ_2 359 383 IPR003591 -
Lal22g1383 1086 SMART LRR_typ_2 551 575 IPR003591 -
Lal22g1383 1086 SMART LRR_typ_2 599 623 IPR003591 -
Lal22g1383 1086 SMART LRR_typ_2 407 431 IPR003591 -
Lal22g1383 1086 SMART LRR_typ_2 142 166 IPR003591 -
Lal22g1383 1086 SMART LRR_typ_2 263 287 IPR003591 -
Lal22g1383 1086 SMART LRR_typ_2 645 668 IPR003591 -
Lal22g1383 1086 SMART LRR_typ_2 190 214 IPR003591 -
Lal22g1383 1086 SMART LRR_typ_2 118 141 IPR003591 -
Lal22g1383 1086 Gene3D Ribonuclease Inhibitor 48 206 IPR032675 -
Lal22g1383 1086 SUPERFAMILY Protein kinase-like (PK-like) 778 1066 IPR011009 -
Lal22g1383 1086 PANTHER LRR RECEPTOR-LIKE KINASE 267 1085 - -
Lal22g1383 1086 PANTHER LRR RECEPTOR-LIKE KINASE 11 195 - -
Lal22g1383 1086 PANTHER LRR RECEPTOR-LIKE KINASE 178 274 - -
Lal22g1383 1086 SUPERFAMILY RNI-like 317 687 - -
Lal22g1383 1086 ProSitePatterns Tyrosine protein kinases specific active-site signature. 919 931 IPR008266 GO:0004672|GO:0006468
Lal22g1383 1086 Pfam Protein kinase domain 797 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g1383 1086 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 195 - -
Lal22g1383 1086 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 267 1085 - -
Lal22g1383 1086 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 178 274 - -
Lal22g1383 1086 PRINTS Leucine-rich repeat signature 624 637 - -
Lal22g1383 1086 PRINTS Leucine-rich repeat signature 645 658 - -
Lal22g1383 1086 ProSiteProfiles Protein kinase domain profile. 795 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g1383 1086 Gene3D Ribonuclease Inhibitor 207 308 IPR032675 -
Lal22g1383 1086 Gene3D Ribonuclease Inhibitor 384 717 IPR032675 -
Lal22g1383 1086 Pfam Leucine rich repeat N-terminal domain 50 91 IPR013210 -
Lal22g1383 1086 Gene3D Ribonuclease Inhibitor 312 383 IPR032675 -
Lal22g1383 1086 Gene3D Transferase(Phosphotransferase) domain 1 874 1076 - -
Lal22g1383 1086 Gene3D Phosphorylase Kinase; domain 1 756 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1383 Lal-Chr22 16716805 16720851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1383 34 967 Receptor kinase-like Gene Family AT4G08850 45.512 0.0 772
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal22g1383 Pkinase 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1383 - - gmx:100815688 1283.86