Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1377 ATGAATGATTCTACAGTGAAGAATTTGGCTATCACAGAGAAGAAAGCACATAAACCAGGTGGTTGTGTTGGCATTTTCTTTCAGCTCTTTGAATGGAAGAGGAAGCTAGCTAAGAAAAAGCTCTTCTCCAAGAAACTTTTACTTCCTGCTCGTGCAAAAAAGTTCAATGGAGATGAAAAAATGTCAAATGCCAAGCTCCATTTGATTACTAATGAGAATAGTGGAGGTTTCCCAAGTGCCAGAAAATGCGGGGGGATTCGTCATTCAAATGTAGACGAAAAGAGTGAAATGCAAGCTCCGGGTCTTGTTGCTAGGTTGATGGGTCTAGAATATGTTCCGGCTGTGCAACAATGCAAGTCGAAGAAGGCTTTGGTTTCTGATAGTGCTAGTGATGAGGAGAAGGAGGCTTTAGTTGATAATTGTGCATCGGATAGACAAGATGTCGATTTGGAAGTGGGGATAGTAAAACATGATTCAAGACCTCAGAAGCTTCAAAAAACCGGGACATGTGAAAAAATGGCAGTAACTAGGTTTGGAGCAGAAGCCTTGCAAATTAAGAGTGTTTTGTCACGAGCAAAGAAGAATAATCACAACCATCATCACCCAAAGCTTGCTTCTCCTTTGAAGAGTCCGAGAATTAATTCAGGAAAGAGTGTCTCTCGAAGCTCTCGGTTAATCGGAGCAGCTACCAAACTTTTGGAACCTGGACTGCAAGCTAGAAGCAGAGCTAAAGATTCTCTTACATATCCTGCTTCCGTGTATCTTCCGAGGACTGGCATTGTACCCAACGGTGTTGGAACAAGCTCAGCAGTTATACAAAATCAATCTTGTTACGATGCAAGCACAGGCAAGACTTCAATGGGGCACACTTCTTGCAAAAATTGTGGTAATTTTCTCGATGTTATTGACTGCAAGCCCGAGTTTGAGAGACGGCCAGCTGTTCCTGCAGATACTGTCCCGGACACGACCGCTCCTACCTCTATGGTATCAGCTCAGAAGAAGGGAAGGACATTCCCTTCGTGTCATGATCAAGAAAGAGATATTGTTCTTCTAAGAAGTAAGGAGAAGATCATATCCGTTGTTACCGAAGAAGAGGGAGAGAACAATACACAAGTGCAACAGTGTTGTAATGTATCCGCTACCAGAAGAATGCCAATGCCTCGTGAAATTCCAGCAACATGGAATTCGTCACACCAGCCGCTTAGGACCCTAGAAGGTGATGCATCTTCTTTTGACTCGAAACAGAAAAATCGAACCCAAGAACACATGCCAATCAATGAAAGACTTTCATCTGAATCAACAATGAGGAATACGCAAATAAAAAGAGTATCACCGTGTACGAGTGGCACTAAAGATTTTGTTGCTTTTAATAGAAACCTAAGTGGTCGAACAAGGATGAGGTCACCTACAAAAGTGGATAGTTCCAAATTTGACATGGATAAAAAACCTTGTAATAGACAGCATAATTCGTTGTCTCATGTAAGGACATTAGAGAGGAAAAGAAGGACTCCAAATGTCACACAAGTTGAAGGTACAGCTTCTGTTAATTCAATTGGTGTGAAACCGAGAAATCTTCATTATGATGGGAGGGACTTTGATGCTTCCTCCATGAAAAGTTCTAATGTCAAAAGTAAACAAGGTGGCCGGGGAAAAACAATTAAGGTTGATGACAATAAGATCAATGAGGTAATTTCATTTGCATTTAACTCCCCAATGAAGCAAAAGCTAGGAATTCCTTCCGAGAAGGAAGAGACAAGCAACAATAATGAGAGGAAGACATTTTTCCAAAGGCCTTCAACCTTGAGAGTTGATGATCTAGGTGCCTTTTTAGAACAGAAATTGAAGGAATTAACCTCTCAAGAAGATGAGGAATTGGCCACAGGTGCTCCACCAAAAAAGTCAAGTGCCGTGATTCTTCAAGAGCTGATATCGGCTCTAGGTTCGGAGCAACTGCTTTGTCATGATGATCATCATATGCTCAATGAAAATGCCGGTCTTCATTATCCGGCAAAACAAGATAGGTTGTCAGTAACCTCATGTAATGGTAATCATCTCAGCCCTGGATCGGTTCTGGAAGCTTCCTTTTCGTCTAGTAGTCTGGATGAATGCTCGGGGCATGGTTTTCACCCCGACTCCGGGAATTACTCATATGATCAAATGGAACATTTGAAATATGATTATGAGGTTTTAGATTCTGCAACATCCTTTAACAAACCGAAGATATGTGCTGAGAAACTGACTGATCTTGTCAACCAAATTCCCAAGGCATTACAAAGTTTATATTCTTTCGGGACAATATTGACAACAAGCAAGCTCACTCATATGAAAGATGTTATCTTGAATGCCGAATTAGTGCTTGGATTATCCACCAACCGCAGTGACGATGAAGTGCCACAACTTCTAATTTCGCGCCTTCTCTTCGATGAACTAGATACCATGGTGGATGATGTGACTTTTACAGATTTTAATCTCTTCGTTGGCTGTGAGGATGATTCTAAACAGAGGAATGAACTAAAGGGGTTTCTCTTTGATTGTGTTATAGAATATCTAGAGTCTAACTTGTGCAGATATTTTAACTGTGGATTCAAGGCATGGACGAAACTATCGTTGTGTCGCACGAAACCTGAGATATTAGCTCAAGAGGTCATGACGGAGATGAAGAAGTCGGCATGTATGGTTGGGATGGTGCCTGATGAAATAATAGAATGGGAGATGAGCCATTCTCTGGGAAAATGGACTGACTTTGATATAGAAGCATTTGATGCTGGTGTTGATATAGATGGAGATATACTTCAAATTTTGGTTGATGAAATTGTTGAAGACTTTGTAAGTTGCAATTTGGGCTCTATATGTTTATAA 2859 0.4099 MNDSTVKNLAITEKKAHKPGGCVGIFFQLFEWKRKLAKKKLFSKKLLLPARAKKFNGDEKMSNAKLHLITNENSGGFPSARKCGGIRHSNVDEKSEMQAPGLVARLMGLEYVPAVQQCKSKKALVSDSASDEEKEALVDNCASDRQDVDLEVGIVKHDSRPQKLQKTGTCEKMAVTRFGAEALQIKSVLSRAKKNNHNHHHPKLASPLKSPRINSGKSVSRSSRLIGAATKLLEPGLQARSRAKDSLTYPASVYLPRTGIVPNGVGTSSAVIQNQSCYDASTGKTSMGHTSCKNCGNFLDVIDCKPEFERRPAVPADTVPDTTAPTSMVSAQKKGRTFPSCHDQERDIVLLRSKEKIISVVTEEEGENNTQVQQCCNVSATRRMPMPREIPATWNSSHQPLRTLEGDASSFDSKQKNRTQEHMPINERLSSESTMRNTQIKRVSPCTSGTKDFVAFNRNLSGRTRMRSPTKVDSSKFDMDKKPCNRQHNSLSHVRTLERKRRTPNVTQVEGTASVNSIGVKPRNLHYDGRDFDASSMKSSNVKSKQGGRGKTIKVDDNKINEVISFAFNSPMKQKLGIPSEKEETSNNNERKTFFQRPSTLRVDDLGAFLEQKLKELTSQEDEELATGAPPKKSSAVILQELISALGSEQLLCHDDHHMLNENAGLHYPAKQDRLSVTSCNGNHLSPGSVLEASFSSSSLDECSGHGFHPDSGNYSYDQMEHLKYDYEVLDSATSFNKPKICAEKLTDLVNQIPKALQSLYSFGTILTTSKLTHMKDVILNAELVLGLSTNRSDDEVPQLLISRLLFDELDTMVDDVTFTDFNLFVGCEDDSKQRNELKGFLFDCVIEYLESNLCRYFNCGFKAWTKLSLCRTKPEILAQEVMTEMKKSACMVGMVPDEIIEWEMSHSLGKWTDFDIEAFDAGVDIDGDILQILVDEIVEDFVSCNLGSICL 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1377 952 MobiDBLite consensus disorder prediction 313 341 - -
Lal22g1377 952 MobiDBLite consensus disorder prediction 392 424 - -
Lal22g1377 952 MobiDBLite consensus disorder prediction 392 408 - -
Lal22g1377 952 MobiDBLite consensus disorder prediction 320 334 - -
Lal22g1377 952 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 9 945 - -
Lal22g1377 952 Pfam DUF761-associated sequence motif 92 116 IPR032795 -
Lal22g1377 952 MobiDBLite consensus disorder prediction 529 552 - -
Lal22g1377 952 MobiDBLite consensus disorder prediction 193 221 - -
Lal22g1377 952 MobiDBLite consensus disorder prediction 409 424 - -
Lal22g1377 952 Pfam Domain of unknown function (DUF4378) 773 937 IPR025486 -
Lal22g1377 952 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1377 Lal-Chr22 16676466 16681281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1377 1 942 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.244 3.00e-81 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1377 - - lang:109357106 1557.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1377 22 16676466 16681281 Lal22g1377 22 16676466 16681281 ECH
Lal18g0625 18 5435116 5440939 Lal22g1377 22 16676466 16681281 LSH