Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1349 ATGATGGAGTGGCAGAAGAAGGAGATGATGATGCAACAGAATGGGAATGAAATGATGTATGTGAAGGTAATGAGTGATGAACAATTAGAAACTCTTAGAAAACAAATTGCTGTGTATGCAACTATTTGTGAACAACTCATTCAGATGCACAATACTCTTTCTACACATCAAAATCTTTCAGGGATTAGGGTGGGAAATATGTACTGTGACCCATTGATGAACTCCATTGGTCACAAACTAACTTCTAGACAAAGATGGACTCCTACACCTATGCATCTTCAGGTTCTTGAGCGTGTTTTTGAGCAGGGGATTGGGACTCCTAGCAAGGAAAAGATTAAGGAAATTACTGCTGATCTTATCCAGCATGGTCAAATTTCTGAGACCAATGTCTATAATTGGTTCCAAAATCGGCGCGCTCGATCAAAAAGAAAGCAGCAGCAACAAAATTTCGGGTCTAGTAATGCTGAATCTGAGGTGGATACTGAGGTTGATTCTAAGGAAAAGAAGACTAAAGCTAAGGAGTTTCAGTCCCAGCATAGAGTAACTACTGGGGTTTTCCAGAACCCTCAAGTAAGCTATGATTTGCAGTACTTAAATTCAGAGTCCAACGAGCCTGATTCCATGTTTCCGCCAGAAGGCAATCTAAGTCCCTCGAGAAATTTTAGTGATGTGCCTGTTTTTGATGGGATGCTATCAAACTCAAGGAGTGACTATCTTGCTGGAAAATTTGAAGAACCCGAGAGCTTCAACTTATACCAACCAACTGGCGACTACAACATGGCAGGTTGA 789 0.4094 MMEWQKKEMMMQQNGNEMMYVKVMSDEQLETLRKQIAVYATICEQLIQMHNTLSTHQNLSGIRVGNMYCDPLMNSIGHKLTSRQRWTPTPMHLQVLERVFEQGIGTPSKEKIKEITADLIQHGQISETNVYNWFQNRRARSKRKQQQQNFGSSNAESEVDTEVDSKEKKTKAKEFQSQHRVTTGVFQNPQVSYDLQYLNSESNEPDSMFPPEGNLSPSRNFSDVPVFDGMLSNSRSDYLAGKFEEPESFNLYQPTGDYNMAG 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1349 262 ProSiteProfiles 'Homeobox' domain profile. 79 144 IPR001356 GO:0003677
Lal22g1349 262 MobiDBLite consensus disorder prediction 141 176 - -
Lal22g1349 262 SMART HOX_1 81 148 IPR001356 GO:0003677
Lal22g1349 262 SUPERFAMILY Homeodomain-like 76 148 IPR009057 -
Lal22g1349 262 PANTHER - 2 261 - -
Lal22g1349 262 MobiDBLite consensus disorder prediction 159 176 - -
Lal22g1349 262 Pfam Homeodomain 83 143 IPR001356 GO:0003677
Lal22g1349 262 CDD homeodomain 83 145 IPR001356 GO:0003677
Lal22g1349 262 Gene3D - 84 150 - -
Lal22g1349 262 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 261 IPR044559 GO:0003700
Lal22g1349 262 MobiDBLite consensus disorder prediction 201 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1349 Lal-Chr22 16430978 16435238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1349 19 262 Wox Gene Family AT4G35550 51.429 1.42e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal22g1349 Homeodomain 9.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1349 - - gmx:100784355 352.443