Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1344 ATGGGATCGAGGGGATTGTTCGGGTGGTCCCCGCCTCACATTCAACCGCTCACACCGGTTTCGGAGGTATCGGAGCCTCCGGAATCTCCGTCACCGTACCTGGACCCGAGCGCGGAGACTTCTATGTCACAGCAGCAGGTTGAGGTCGAGGAGGAGATGGAGGAGCCTGAGGAGATTGAGCCACCGCCGGCTGCTGTTCCTTTCTCACAGCTATTTGCTTGTGCCGACCGTTTGGATTGGTTCCTCATGTTCGTCGGCTCTATTGCTGCTGCGGCTCACGGAACAGCTCTTGTTGTTTACTTGCACTATTTTGCGAAGATTATCCATGTGCTGAGGATGGATTCCCAGGAAGTAATGTTGGAGGAACAGTTTAACAGATTCAGTGAGCTTGCTTTAACCATTGTTTATATTGCTGCGGGAGTTTTTACTGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACTGGGGAACGACAGACTGCTGTCATCAGATCAGAATATGTTCAAGTATTACTAAACCAAGATATGAGTTTTTTTGATACTTATGGAAATAATGGAGACATAGTGAGTCAAGTGTTGAGTGATGTGCTGCTTATTCAGTCTGCCCTTAGTGAAAAAGTTGGAAATTATATTCATAATATGGCTACATTCATTAGCGGTCTTGTCATTGGACTTGTCAATTGTTGGCAGATTGCTTTGATAACGTTAGCCACAGGTCCATTCATTGTTGCTTCTGGAGGAATATCAAATATATTCCTCCACAGGCTTGCAGAGAATATTCAAGATGCGTATGCTGAAGCAGCAAGCATTGCTGAACAGGCAGTTTCCTATATAAAGACATTGTATGCATTTACAAATGAATCGTTGGCCAAGTATTCATATGCAACATCACTGCAAGCTACTCTCAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGGCTTGCAATATGTTCCTGTGCACTACAACTCTGGGTTGGGAGGTTCTTGGTTATTCATGGAAAAGCACATGGCGGTGAAATTATAACAGCTCTCTTTGCTGTAATTTTGAGTGGCTTGGGGTTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGACGAATAGCTGCTTATAGATTATTTGAGATGATAAGCCGGTCATCCTCATCTGTTAATCATGATGGCACTGCCCCTGATTCTGTGCAAGGAAATATACAGTTTCGGAATGTTTATTTCAGTTATCCATCTCGTCCTGAAATCCCTATACTGAGTGAATTTTATCTCACTGTACCTGCTAAGAAAGCTGTGGCACTTGTTGGCCGAAATGGCTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGTTTCTATGATCCTACATTAGGTGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGTTGAGGAGCCAAATAGGATTAGTCACCCAGGAGCCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATCGCATATGGGAGAGATGCCACCATGGATCAAATTGAAGAGGCCGCTAAAATAGCTCGTGCACATACATTTATCAGCTCGTTAGAGAAAGGTTATGACATGCAGGTTGGCAGGGCTGGCCTAGCCTTGAACGAAGAGCAGAAAATAAAACTCTCTATTGCAAGAGCTGTGCTTCTGAATCCATCAATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAAAGGGCTGTCCAGGAGGCTCTGGATCTGCTTATGTTGGGACGCTCAACTATAATAATTGCTCGAAGGCTTAGTTTCATACGGAATGCGGATTACATAGCTGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCATGATGAATTATTGTCCCGGGGTGGCTTATATGTAGAGCTTCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGATACTGCAGCATTCCAAATTGAGAAGGATTCTTCAGCAAGTCGTAGTCTAAAAGAACCATCTTCCCCCAAAATGTTGAAGTCACCTTCTCTTCAAAGTAGGCCTAATGTATCTCGAGCTACAGGTGGTATCTTTAACTTGCAAGAATCATTAAAAGTCTTGAGCTCACCACCTGAAGAGATGCTGAAAAATGGTCAGGCTTTGGATGATGCTGATAAAGAGCCATCAATAAGAAGACAGGATAGTTTTGAAATGAGACTGCCAGAGTTACCCAAGATTGATGTTCAGTCTGTGCATCAACAAACATTAAATGATTCTGACCCAGAATCCCCAGTTTCTCCTCTGTTGACATCTGATCCTCAAAATGAACGCTCCCATTCACAGACTTTCAGTAGACCACATAGTCATTCTGATGATGATTCAGTTACAATGAGAGAAAGAAAGGACAAACAACATCGAAAACCTCCATCTATTCGGAAGCTAGTTGAGCTTAGTTTTGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATTGGTGCTGCTATCTTTGGCTCTTTCAATCCCCTTCTTGCTTATTTTATTGGCCTCGTTGTGACAGCTTACTATAGAATTGATGAAGAGCATCACTTACAACACGAGGTTAACAAATGGTGCCTGATCATTGGTTGCATGGGGATTGTGACAGTTGTTGCCAACTTTTTGCAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAATTGGATGGTTTGATGCTGAGGAAAACAGTGCTGACAATTTATCCATGCGATTGGCCAATGATGCTACTTTTGTACGAGCTGCTTTCAGCAACCGACTTTCCATATTTATACAGGATAGTGCTGCAGTTATTGTTGGTCTTCTCATTGGTGCTTTGCTGCACTGGCGATTAGCACTTGTGGCTTTTGCAACCATTCCGGTTCTCTGTTTGTCGGCCTTTGCCCAGAAATTATGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGACGCTGTTAGAAACATTTACACCGTCGTTGCATTTTGTGCTGGTAATAAGGTGATGGAGCTCTATAGGCTGCAATTAAATAAAATATTTAAGCAGAGCTTTCTTCATGGAATGGCAATTGGTTTTGCATTTGGCTTTTCACAATTTCTTCTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCGATGTGTATAAAAAATGGTTATATTGATCCACCTACTGCTCTCAAGGAGTACATGGTTTTCTCATTTTCAACATTTGCACTTGTGGAACCATTTGGATTGGCTCCTTACATACTTAAACGACGGAAATCTCTCATATCAGTGTTTGACATTATAGATCGTGTGCCTAAGATTGATCCTGATGATAGCTCAGCATTGAAGCCACCCAATGTATATGGAAGCATCGAGTTAAAGAATGTTGATTTTTGTTATCCATCTCGTCCCGAAGTGTTGGTATTGAGCAATTTTAGTCTCAAAGTCAGTGGGGGACAAACAGTTGCTATTGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATCATATCTTTGATTGAGAGATTTTACGATCCGGTTGCTGGTCAAGTTATACTTGATGGTAGGGACTTAAAGCTCTATAACCTGAGATGGTTGAGGAGTCACCTTGGTCTTATTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATAATATATGCAAGGCATAATGCCAATGAAACTGAGATGAAAGAAGCTGCAAGAATAGCTAATGCTCATCATTTCATTAGCAGCTTGCCTCATGGTTATGACACTCATGTCGGGATTAGAGGTGTTGACTTAACCCCGGGACAGAAACAGAGAATTGCAATTGCGAGGGTAGTGCTGAAAAATGCTCCTATCTTGTTGGTAGATGAAGCAAGCTCATCAATTGAATCTGAGTCAAGTCGAGTGGTGCAAGAGGCTCTTGACACCCTAATAATGGGTAACAGGACCACTATATTAATAGCGCATAGGGCTACAATGATGAGGCACGTGGACAATATTGTAGTGCTTAATGGAGGACGGATAGTAGAGGAGGGGATCCACGATTCACTGGCTGCAAAGAATGGTCTGTATGTCCAATTGATGCAACCTCATTTTGGTAAGGCAATGCGTCAGCATCATCCGCTTGTTATGTGA 4218 0.4239 MGSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPSAETSMSQQQVEVEEEMEEPEEIEPPPAAVPFSQLFACADRLDWFLMFVGSIAAAAHGTALVVYLHYFAKIIHVLRMDSQEVMLEEQFNRFSELALTIVYIAAGVFTAGWIEVSCWILTGERQTAVIRSEYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLVIGLVNCWQIALITLATGPFIVASGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIKTLYAFTNESLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNHDGTAPDSVQGNIQFRNVYFSYPSRPEIPILSEFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIARAHTFISSLEKGYDMQVGRAGLALNEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSFIRNADYIAVMEEGQLVEMGTHDELLSRGGLYVELLRCEEAAKLPKRMPVRNYKDTAAFQIEKDSSASRSLKEPSSPKMLKSPSLQSRPNVSRATGGIFNLQESLKVLSSPPEEMLKNGQALDDADKEPSIRRQDSFEMRLPELPKIDVQSVHQQTLNDSDPESPVSPLLTSDPQNERSHSQTFSRPHSHSDDDSVTMRERKDKQHRKPPSIRKLVELSFAEWLYAVLGSIGAAIFGSFNPLLAYFIGLVVTAYYRIDEEHHLQHEVNKWCLIIGCMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEIGWFDAEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATIPVLCLSAFAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAMCIKNGYIDPPTALKEYMVFSFSTFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDSSALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVSGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVILDGRDLKLYNLRWLRSHLGLIQQEPIIFSTTIRENIIYARHNANETEMKEAARIANAHHFISSLPHGYDTHVGIRGVDLTPGQKQRIAIARVVLKNAPILLVDEASSSIESESSRVVQEALDTLIMGNRTTILIAHRATMMRHVDNIVVLNGGRIVEEGIHDSLAAKNGLYVQLMQPHFGKAMRQHHPLVM 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1344 1405 MobiDBLite consensus disorder prediction 787 812 - -
Lal22g1344 1405 Pfam ABC transporter transmembrane region 84 357 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal22g1344 1405 Pfam ABC transporter transmembrane region 836 1100 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal22g1344 1405 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1399 - -
Lal22g1344 1405 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 831 1094 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal22g1344 1405 MobiDBLite consensus disorder prediction 755 812 - -
Lal22g1344 1405 MobiDBLite consensus disorder prediction 755 786 - -
Lal22g1344 1405 MobiDBLite consensus disorder prediction 668 696 - -
Lal22g1344 1405 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 382 - -
Lal22g1344 1405 Pfam ABC transporter 428 572 IPR003439 GO:0005524
Lal22g1344 1405 Pfam ABC transporter 1172 1320 IPR003439 GO:0005524
Lal22g1344 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 641 IPR027417 -
Lal22g1344 1405 Gene3D ABC transporter type 1, transmembrane domain 798 1142 IPR036640 GO:0005524|GO:0016021
Lal22g1344 1405 PANTHER ABC TRANSPORTER B FAMILY 19 1399 - -
Lal22g1344 1405 SMART AAA_5 434 814 IPR003593 -
Lal22g1344 1405 SMART AAA_5 1181 1368 IPR003593 -
Lal22g1344 1405 CDD ABC_6TM_Pgp_ABCB1_D2_like 826 1137 - -
Lal22g1344 1405 Gene3D ABC transporter type 1, transmembrane domain 61 388 IPR036640 GO:0005524|GO:0016021
Lal22g1344 1405 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1154 1391 IPR003439 GO:0005524
Lal22g1344 1405 SUPERFAMILY ABC transporter transmembrane region 813 1139 IPR036640 GO:0005524|GO:0016021
Lal22g1344 1405 Coils Coil 253 273 - -
Lal22g1344 1405 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 407 642 IPR003439 GO:0005524
Lal22g1344 1405 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal22g1344 1405 Gene3D - 397 650 IPR027417 -
Lal22g1344 1405 Gene3D - 1144 1401 IPR027417 -
Lal22g1344 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1143 1390 IPR027417 -
Lal22g1344 1405 SUPERFAMILY ABC transporter transmembrane region 71 382 IPR036640 GO:0005524|GO:0016021
Lal22g1344 1405 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1344 Lal-Chr22 16361016 16377574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1344 53 697 Calmodulin-binding Proteins AT2G36910 44.479 5.18e-170 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1344 K05658 - gmx:100789116 2447.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0593 18 5050978 5060634 Lal22g1344 22 16361016 16377574 LSH