Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1339 ATGGAGTCCAAACATGAAACACCGAGTATAATTTTGCGATTGATGGGTCTTGACGATGTGCGTCCCCGGCATCATGTTAGAAATACGCAAAAAGTTCTCTCTGAGAAATACCATCAGAAAGTTGCCTCTATCGGTGTTAGAAAGAAGCGTTCATCTGGCCAGCACGATTCTTTTACAACGAGTACTGGTGAAAAGGAAGAATCCGTGGATGATTTAAAAGTGGTGAAAACAATAAGGAGAGATGAGCACCATAACCCGTCAAAGGGAAACGGGAAAGAAAAAGGTGTGCAGCGAATGATATTGGATGATGCTTCTTACTTGTCAGATAACGGGAAGCCTGAAACTTCGGCTGATGCCATTAGTTCATTCAATTATGAAAAAAGTGTGAATTCATGGAAGATGGCTGAGCAGAGAGGAAATGGTTTAAAATATTCTTCATTTCATGGTTCTTGCAAAAATTCTCGTTTCGCTGATGGGCTTCTCGAAGATATGTTTTGTCCTAAAATCAAGAGAGCATATCCTGAAATAAAAGATAGGAAGAGGACTTCCTATCACATGGATTTTCATACCGAAAGTTCTAAGTCTTTTAGTAAAGTTTCAGAGAATGTTTCTACACGAACTGAAAACGTCACAAACAAAGTTTTAGATAATGCTTCAAGTTCATTTTTCGGAAGGAATGAAGCGTCTGCCAATAGTTTTGATATGCTGAAGCCTGCTTCAAATGTTTCAGTTAATGAGATCCAATGCAATTCCGCATTCTTATATTCTAATGGTTCTTCTGTTCTACATTGTCATGGCAGTACCTATCACCAATTGCCTTTGATTTCTGAACATGGAAATGGAGCAAGAAATTTTAGTTACCAAAGTGGTTATAGCAATGATAAAATTGGAAGGAACATTAGATCTAAGGTTGCTGATAATCACGGAACCATGACTAATGATAACTTGTTTCAGAAATATTGGGGTTTGAGGAAGAATGCATCTGTAAATTACCCAACCTTGAAGTCGAAGTATCAAAATATCAACAGGAGCGATTGTTTCGAAGAAAATCGTATGGAAGAGAATTGTATTGGGCTGCATAAGTTGAAAAAGAGATGTTACGGGAATGATTTGTCTGATCAGAAACCTATGCTTCTACAATTGTCAAGGTCTGAGCCTTCTCCTAACTTCATAGATAATCGGGCCTTGCACGGGACATGCTTAATGGATGATGAAATGAAGAACTATAAGCACGAAGACAGTAATATGTCTACGCAAAATAGCACATCTCCTAATTTATCAGTTGATTGCTCGGTGTCTGATGCAAAGATTGAGGTTCTTGGCAGATCACATATTCACCCAAGTAAGCCGCAAACTGAATCAAAAGACAGTGATTTTCAGAATCATGGTTTGCATGCTTCAATACAAAAGGATACATCAGAATTTGAAGATTCTGCTTCATTTTACTCTTGGAGTGAGCCAGATTCCCATGGTAGCTTTGAGGAGGAGTGTGAACCTAGTCCAGTTTCAGTTCTGGATGTAGCATTTAGAGAAGACATATCATCAAGCTCTGAATGCTTGAAGGTTGTTCGAGATGGTGGATATGATTCACCGGAAGTGGATGACGAAGGATTTGATTTGAATGTTTCAAGTGATGTAGACTGTGGGGATAAATCTGTAGGTGACTTCAAAGAGAAGCAAGGATTATTTAGAGCCGAAGAAAGTAGGGATATCTCCTATGTTGTTGCGGTCTTAACCGAGGCAGGTATTTCTAATAGGGGTCTGTTTACGCATTTTTCTACATGGCACTCTGCAGAATGCCCTATTAGCCTTTCCATCTTTGAAATCCTGGAAAGGAAGTTTGGTGAGCAGCAACTTTGGAAGAGATCTGAAAGGCGGCATCTCTTCGATCGCATTAATTTAGTGTTGTTAGAGATTCTAAAGCCGTGTTCATATATCCCGACATGTAGAAAGCCCGTGTCTAAAAGGTTGAATCCGGAACCAAGGCAGAACATGATTTCCGAGATATGGGCCTTGCTTGTTGCCCAAGAAAAGGAAGCTAGTAAGGATTCAGCAGACAAGATGGTTGACGGGGAAATTACGTGGACAGAACTACGTGAAGATATTTTAGTTATCGTTAAGGAGATAGTTAAGATGTTAATAGAGGAGCTTGCGAATGAGATGATTAGCTTGGAGAGTTTATGA 2184 0.3947 MESKHETPSIILRLMGLDDVRPRHHVRNTQKVLSEKYHQKVASIGVRKKRSSGQHDSFTTSTGEKEESVDDLKVVKTIRRDEHHNPSKGNGKEKGVQRMILDDASYLSDNGKPETSADAISSFNYEKSVNSWKMAEQRGNGLKYSSFHGSCKNSRFADGLLEDMFCPKIKRAYPEIKDRKRTSYHMDFHTESSKSFSKVSENVSTRTENVTNKVLDNASSSFFGRNEASANSFDMLKPASNVSVNEIQCNSAFLYSNGSSVLHCHGSTYHQLPLISEHGNGARNFSYQSGYSNDKIGRNIRSKVADNHGTMTNDNLFQKYWGLRKNASVNYPTLKSKYQNINRSDCFEENRMEENCIGLHKLKKRCYGNDLSDQKPMLLQLSRSEPSPNFIDNRALHGTCLMDDEMKNYKHEDSNMSTQNSTSPNLSVDCSVSDAKIEVLGRSHIHPSKPQTESKDSDFQNHGLHASIQKDTSEFEDSASFYSWSEPDSHGSFEEECEPSPVSVLDVAFREDISSSSECLKVVRDGGYDSPEVDDEGFDLNVSSDVDCGDKSVGDFKEKQGLFRAEESRDISYVVAVLTEAGISNRGLFTHFSTWHSAECPISLSIFEILERKFGEQQLWKRSERRHLFDRINLVLLEILKPCSYIPTCRKPVSKRLNPEPRQNMISEIWALLVAQEKEASKDSADKMVDGEITWTELREDILVIVKEIVKMLIEELANEMISLESL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1339 727 MobiDBLite consensus disorder prediction 49 70 - -
Lal22g1339 727 PANTHER AFADIN 299 726 - -
Lal22g1339 727 PANTHER AFADIN 1 261 - -
Lal22g1339 727 PANTHER DUF4378 DOMAIN PROTEIN 299 726 - -
Lal22g1339 727 PANTHER DUF4378 DOMAIN PROTEIN 1 261 - -
Lal22g1339 727 MobiDBLite consensus disorder prediction 43 70 - -
Lal22g1339 727 Pfam Domain of unknown function (DUF4378) 570 720 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1339 Lal-Chr22 16301620 16306215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1339 487 724 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 32.946 4.52e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1339 - - lang:109356968 1173.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1339 22 16301620 16306215 Lal6g1669 6 19450621 19455185 LSH