Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1328 ATGACTCAGTCTGTGGAAGTGTTGAATCGTTATGGAACAGATCTGGTTGGAGAAGCAAGAGGTTCAGAAAGAGAGTGTATGGCAGGATTTGAGTGTTTTCTGAACGTAGTGAGAGCATTGGGAATGGGATCTTGTATATCAGAGGTTGGAGGAAGAGGTGGTAGTGGGTCCCCACCACTTGTTCCACAGTTGAATAGTTTGGATAGTGGAAAGAGGAGGAGAATGAAGGGTTCATCTTCTTTTGATTATAAAGTAGTGCCTGGGAGAATGTTCTTGAATGGATCCAGTGATGTTGCATCTTTGTATTCTAAGCAAGGTAAAAAAGGGATCAACCAAGATGCTATGCTAGTTTGGGAGAACTTTTGTTCAAAGGAGGGAACCATATTTTGTGGTGTTTTTGATGGTCATGGACCTTTTGGCCATAGGGTCGCAAAGAGAGTTAGGGATTCTTTCCCTTTAAAGCTTATTGCTCAATGGGATTTGCATCATAGGAATAAAGACGGACTCAGTGATCACAGCAGTGCTGCAGGAAGTTGTAATTCTGATATTGGATTTAGACTGGCTGATGAGAAACCTAATGAGCTTGGTGGAACAAATAATATATTAACACTAAGAGAATCTTTTTTGAAGGCTTCTAAGTTTATGGACAAAGAACTGAAACTGCACCCTGATATTGATTCCTTTTGCAGTGGAACTACAGCAGTTACCTTAGTCAAGCAGGGTCAGGACCTTGTTATTGGAAATGTTGGGGACTCAAGAGCTGTATTGGGTACCCGAGATCATAATGATTTTCTTATTGCTGTTCAGTTGACCATTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGGATCAAGCGTCATAGAGGAAGGGTCTTTTCCCTTCGGAATGAACCTGATGTTTCTCGAGTGTGGCTTCCTAACGCTGATTTCCCTGGTCTTGCCATGGCACGGGCTTTTGGAGATTTTTGCCTGAAGGACTATGGATTGATCGCTGTTCCAGATGTGTCACATCATCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCAACAGATGGGATCTGGGATGTTTTATCGAATGAAGAAGTTGTGGACATCGTGGCATCTGCTTCTCAGTCTAATGCAGCTCGAGTACTTGTTGAGTCAGCTGTAAAAGAATGGAAGACAAAATACCCTTCTTCTAAGATTGACGATTGTGCTGCAGTTTGCCTCTTCTTTGATTCAAATTCTGAGCTCAAGTCAGCGTATGCGACAGAGGAGTTGATACCAGAGGCATCAATTGACCAATCTGAGCACTCATCTCTACTTTGTGAGAAGGGAATTGTTGTGGATGCTTAG 1341 0.4243 MTQSVEVLNRYGTDLVGEARGSERECMAGFECFLNVVRALGMGSCISEVGGRGGSGSPPLVPQLNSLDSGKRRRMKGSSSFDYKVVPGRMFLNGSSDVASLYSKQGKKGINQDAMLVWENFCSKEGTIFCGVFDGHGPFGHRVAKRVRDSFPLKLIAQWDLHHRNKDGLSDHSSAAGSCNSDIGFRLADEKPNELGGTNNILTLRESFLKASKFMDKELKLHPDIDSFCSGTTAVTLVKQGQDLVIGNVGDSRAVLGTRDHNDFLIAVQLTIDLKPNLPREEERIKRHRGRVFSLRNEPDVSRVWLPNADFPGLAMARAFGDFCLKDYGLIAVPDVSHHRLTEKDEFVVLATDGIWDVLSNEEVVDIVASASQSNAARVLVESAVKEWKTKYPSSKIDDCAAVCLFFDSNSELKSAYATEELIPEASIDQSEHSSLLCEKGIVVDA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1328 446 Gene3D - 95 409 IPR036457 -
Lal22g1328 446 SUPERFAMILY PP2C-like 98 409 IPR036457 -
Lal22g1328 446 PANTHER ALPHABET, ISOFORM E-RELATED 42 416 - -
Lal22g1328 446 CDD PP2Cc 98 407 IPR001932 -
Lal22g1328 446 Pfam Protein phosphatase 2C 186 386 IPR001932 -
Lal22g1328 446 ProSiteProfiles PPM-type phosphatase domain profile. 98 407 IPR001932 -
Lal22g1328 446 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 416 - -
Lal22g1328 446 SMART PP2C_4 87 405 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1328 Lal-Chr22 16167894 16177443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1328 69 411 PP2C-type Phosphatase Gene Family AT1G16220 57.507 6.55e-144 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1328 - - gmx:100810538 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0579 18 4928766 4933296 Lal22g1328 22 16167894 16177443 LSH