Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1325 ATGATTTATGTTTGTTGTTTTATTTGTTTTGTTTCAATGTTTAAGAAAAGACACACCCTTTGTTATGTTTTAAGGGAATTATTGTCATTGTTTTTTGTGTTTTTGTTCAGCTTGCACCATAGCACTGTGCAATGCCAAGGAAGGTTAAGTAAGCATGTTTCTTCAGCACCTTCTAAGCCATCACCATCAGAATACAAAGATGAACCTAAGAGAATTATGATTAGCATAATTTTAGGAGTAGTAACTGGACTAGTTGGTTCTGTTTTCTTTGCATTTGTAGTTCGATGTGTTGTTCGGTATCTTAATCGAACACCGATCTTCAAGGGTCCTGTGATATTCTACCCAAAAATTGAACCCGAGACACTCCAATTAGCATTGACAAAGGAAAACAACTTGCTCGGTTTGAGTCCAAATGGAAAATACTACAAAACTGTGCTTGACAATGGCCTCACTATTGCAGTCAAAAGGGTAACACCCTTTGAGTGCAATTCACCGGAAACCGTAAGGAGGAAATCGGTGAAGAGGCAGATACAAAATGAGCTAGAGATTCTTGCCAGCTTAAGGCATAGGAACTTGATGAGCTTGAGGGCTTATGTTCGTGAACCGGATAGTTTCTCGTTGGTTTACGATTATGTATCCACCGGGAGCCTTGCCGATTTGATGAATAGAGTGAGGGAAAATGAGTTGCAGATTGGTTGGGAAGTTAGGCTAAGAATTGCTGTTGGTGTAGTGAAGGGTCTTCAGTATCTTCATTTCACTTGTGTGCCTCAGATTCTACATTGCAATTTGAAGCCGACAAATGTGATGTTGGATGCAGAGTTTGAACCAAGATTGGCTGATTATGGATTGGCTAAACTTCTTCCAAACTTGGATAGAGGAACACCTGAATCTTCTCATGATTGCAGAGTGGTTAGTGTGTTTTGCAATTTCAGCAAGTACACAGACAAAAGTGACATTTTCAGTTTTGGCATGATACTTGGCGCATTGTTAACGGGTAAGGATCCGAAAGATCCATTCTTTGGAGAAGCGGCGAGTGGAGGAAGTTTGGGAAGTTGGCTGCAACACTTGCAGCAAGCAGGCGAAGGTCGGGAAGCACTCGATAAAAGTATTCTCGGCGAAGAAGGAGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGTATGTCTATCTGATATGCCTGCAGATAGGCCTTCTAGTGATGAACTTGTTCACATGCTAACACAACTGCATAGTTTTTGA 1245 0.4104 MIYVCCFICFVSMFKKRHTLCYVLRELLSLFFVFLFSLHHSTVQCQGRLSKHVSSAPSKPSPSEYKDEPKRIMISIILGVVTGLVGSVFFAFVVRCVVRYLNRTPIFKGPVIFYPKIEPETLQLALTKENNLLGLSPNGKYYKTVLDNGLTIAVKRVTPFECNSPETVRRKSVKRQIQNELEILASLRHRNLMSLRAYVREPDSFSLVYDYVSTGSLADLMNRVRENELQIGWEVRLRIAVGVVKGLQYLHFTCVPQILHCNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGTPESSHDCRVVSVFCNFSKYTDKSDIFSFGMILGALLTGKDPKDPFFGEAASGGSLGSWLQHLQQAGEGREALDKSILGEEGEEDEMLMAVRIAAVCLSDMPADRPSSDELVHMLTQLHSF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1325 414 Pfam Protein kinase domain 132 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g1325 414 PANTHER - 24 414 - -
Lal22g1325 414 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 24 414 - -
Lal22g1325 414 Gene3D Phosphorylase Kinase; domain 1 114 211 - -
Lal22g1325 414 Gene3D Transferase(Phosphotransferase) domain 1 212 413 - -
Lal22g1325 414 SUPERFAMILY Protein kinase-like (PK-like) 130 408 IPR011009 -
Lal22g1325 414 ProSiteProfiles Protein kinase domain profile. 127 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1325 Lal-Chr22 16130891 16133500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1325 73 411 Receptor kinase-like Gene Family AT2G31880 34.648 1.70e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Lal22g1325 Pkinase 3.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1325 - - gmx:102664172 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0571 18 4796060 4798721 Lal22g1325 22 16130891 16133500 LSH