Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1279 ATGAGGCTTTTCATATCAGCTTTTTGTGTTATTGTCATATTCTCTTATGCATCTGCTTATGATCCTTTGGATCCAAATGGTAACATAACTATCAAATGGGATGTTGTGTCTTGGACAGCAGATGGATATGTGGCAGTGGTAACAATAAACAATTTCCAAATATTTAGACACATAATGAATCCTGGATGGACATTGAGTTGGTCATGGGCTAAGAAAGAAGTTATATGGTCTATGGTTGGATCTCAAACTACAGAACAAGGAGATTGCTCTAAGTTCAAAGGGAATGTACCTCATTGCTGCAAGAAAACACCAACAGTTGTGGACTTACTCCCTGGGGTACCCTACAACCAGCAATTCTCAAATTGTTGTAAGGGTGGAGTTGTTGCAGCATGGGGCCAAGACCCTTCAGCAGCAATATCATCATTCCAAGTGAGTATTGGACAAGCTGGTACCTCAAACAAGACAGTTAAACTTCCAATGAACTTCAGTCTCTTGGCTCCTGGACCAGGCTACACTTGTGGCCCTGCCAAGATTGTTCCGTCGACCGTTTTCCTTACGGCTGATAAACGCCGCAAAACTCAAGCGCTAATGACGTGGAATGTTACCTGCACATACTCGCAATTTCTGGCTCGGAAAAACCCAAGTTGCTGTGTATCGATGTCGTCCTTCTATAATGAAACCATTACCCCTTGTCCTTCATGCGCCTGTGGCTGCCATAACAAGAAGAATTGCGTCGTGAGTGACTCAAAATTTCTCAGCATCAAGGGTATTCATACTCCAAAGAAAGACAATGAACCATTGCTGCAGTGCACTCATCATATGTGTCCAATCAGGGTACACTGGCATGTGAAGCAAAACTATAACGACTATTGGCGAGTGAAGATCGCCGTAACGAATTTCAATTACAAGATGAATTACTCCCTCTGGACACTTGCTGTTCAGCATCCAAATCTTAACAATGTCACTCAAGTTTTCAGCTTTGATTACAAGCCTATCCTTCCCTATGAATCCATAAATGATACAGGAATGTTCTATGGCATGAAATATTTCAATGATTTACTAATGGAAGCTGGACCATCTGGTAATGTTCAATCCGAACTACTTCTTCGGAAAGATAAGGATACATTCACATTCAAGCAAGGATGGGCATACCCTCGAAAGGTATACTTTAACGGCGAAGAATGCATGCTACCACCACCAGATACATACCCTTTCCTCCCAAACTCGGCACCGAAAAACGTACTTAACTTTACCCCGGCATTCATTTTCTCATTGCTTGCCTTGCTAGCTGTTCTGTGA 1299 0.4234 MRLFISAFCVIVIFSYASAYDPLDPNGNITIKWDVVSWTADGYVAVVTINNFQIFRHIMNPGWTLSWSWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSAAISSFQVSIGQAGTSNKTVKLPMNFSLLAPGPGYTCGPAKIVPSTVFLTADKRRKTQALMTWNVTCTYSQFLARKNPSCCVSMSSFYNETITPCPSCACGCHNKKNCVVSDSKFLSIKGIHTPKKDNEPLLQCTHHMCPIRVHWHVKQNYNDYWRVKIAVTNFNYKMNYSLWTLAVQHPNLNNVTQVFSFDYKPILPYESINDTGMFYGMKYFNDLLMEAGPSGNVQSELLLRKDKDTFTFKQGWAYPRKVYFNGEECMLPPPDTYPFLPNSAPKNVLNFTPAFIFSLLALLAVL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1279 432 PIRSF COBRA 1 432 IPR006918 GO:0010215|GO:0031225
Lal22g1279 432 PANTHER COBRA-LIKE PROTEIN 4 430 - -
Lal22g1279 432 PANTHER PROTEIN COBRA 4 430 IPR006918 GO:0010215|GO:0031225
Lal22g1279 432 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1279 Lal-Chr22 15450688 15454780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1279 1 432 COBRA Gene Family AT3G29810 63.146 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1279 - - gmx:100783410 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1279 22 15450688 15454780 Lal22g1279 22 15450688 15454780 ECH
Lal22g1279 22 15450688 15454780 Lal13g1752 13 17079088 17082641 PCT
Lal22g1279 22 15450688 15454780 Lal24g1326 24 14584071 14587373 PCT