Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1277 ATGGCCCAATCCTTCAATCAGACCGAGATTAATTGGAATAAGCTAGATAAAACTAAGTTCTACGTCGTAGGAGCTGGCCTTTTTACAGGTATTACGGTGGCACTTTACCCAGTTTCCGTTGTGAAAACTAGGTTGCAGGTTGGGACAAGGGATGCTGTAGAGAAAAGTGCATTTTCTATTGCAAGAGGGTTACTTAGAACAGATGGTGTCCCTGGTTTATATAAAGGGTTTGGCACAGTTATCACAGGTGCAATTCCGGCCAGAATAATATTTCTCTCCGCCCTAGAGACCACAAAAGCAGCTACCTTCAGAGTGCTTGAACCATTCAGACTATCTGAAACTACCAATGCTGCCTTAGCAAATGGATTTGCAGGGATGACATCTTCGCTTTTTGCGCAATCGGTGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGACATGCCCAGTATAGCGGGGGTCTAGACGTTGCTCGTAAGATTTTAAAGTCTGATGGAATCCGGGGATTTTATCGAGGATTTGGTCTATCTGTTGTTACTTATTCACCTTCCAGTGCTGTATGGTGGGCCAGTTATGGTTCAAGCCAACGCATTATTTGGAGATTCTTGGGGCATGGTATTGAATATGATAAAGGCACTCCTAGCCTGCAGAAGATTTTGTTAGTTCAAGCTTCTGGAGGTATTATTGCTGGTGCAACTTCATCCTGTATTACAACCCCACTAGATACTATTAAGACAAGATTACAGGTGATGAGTTATGAAAAGAAAAGCACTGTAAAACAAGTTGTTAAAGATTTAATCAATGAAGATGGTTGGAAAGGCTTTTATAGAGGGTTTGGTCCAAGATTTTTTAGCATTTCAGCTTGGGGTACTTCTATGATATTGACATATGAGTATCTGAGCACACTAGACAAGATAAGATTAGCTTCTATTGTAGAAAAGATGGTAGAGTCGCACCTTAGGTGGTTTGGACATGTGTGGAGGAGACTGATAAAAGCCCTCATAAGGAGAGCAGATCAAATCAAAGCTAGTCCAATTCCTAGAAGAAAAAAGGGACCCAAACAACATAGGAGAATGATAAAGAAAGACTTGGAGGTCAATGCTTTGTCAAAGAACATTTATGATAGAGCATTACGGTGTCATTCAATTCATGTATTCGACCCACGTAATGTGATAAATGCTTGGTTTGATGTAACCTTTCTCCGCATTTCTTTTCTCATGTTACTGGCTATTGGAACGCTTATGTACAATAGAAGAATAGATGTAAATCATGAAGGGGTCTGA 1302 0.4063 MAQSFNQTEINWNKLDKTKFYVVGAGLFTGITVALYPVSVVKTRLQVGTRDAVEKSAFSIARGLLRTDGVPGLYKGFGTVITGAIPARIIFLSALETTKAATFRVLEPFRLSETTNAALANGFAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKILKSDGIRGFYRGFGLSVVTYSPSSAVWWASYGSSQRIIWRFLGHGIEYDKGTPSLQKILLVQASGGIIAGATSSCITTPLDTIKTRLQVMSYEKKSTVKQVVKDLINEDGWKGFYRGFGPRFFSISAWGTSMILTYEYLSTLDKIRLASIVEKMVESHLRWFGHVWRRLIKALIRRADQIKASPIPRRKKGPKQHRRMIKKDLEVNALSKNIYDRALRCHSIHVFDPRNVINAWFDVTFLRISFLMLLAIGTLMYNRRIDVNHEGV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1277 433 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Lal22g1277 433 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Lal22g1277 433 Pfam Mitochondrial carrier protein 230 308 IPR018108 -
Lal22g1277 433 Pfam Mitochondrial carrier protein 25 101 IPR018108 -
Lal22g1277 433 Pfam Mitochondrial carrier protein 119 205 IPR018108 -
Lal22g1277 433 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 309 - -
Lal22g1277 433 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
Lal22g1277 433 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Lal22g1277 433 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Lal22g1277 433 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Lal22g1277 433 Gene3D Mitochondrial carrier domain 20 314 IPR023395 -
Lal22g1277 433 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 309 - -
Lal22g1277 433 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1277 Lal-Chr22 15363287 15372899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1277 1 313 Chloroplast and Mitochondria Gene Families AT5G15640 71.111 3.50e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1277 K15121 - gmx:100782750 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1277 22 15363287 15372899 Lal22g1277 22 15363287 15372899 ECH
Lal24g1336 24 14688456 14693966 Lal22g1277 22 15363287 15372899 PCT
Lal22g1277 22 15363287 15372899 Lal24g1336 24 14688456 14693966 PCT