Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1265 ATGGCTGTTGAGGAGAGTGAGGTTGTGATTCCTGAGCTAGAAACTGAGGAGAACTTAATTGCTACAGCAAGACATCTTGTAAAGGCATTAGGGTCAAATAGTAACCTCACTAGTGATGCCAAGAAAATTCTCGCCGATCTCGGCTTCCAGATGTGCTCTATAAACATATCCGGTGAGAAGGAGGAGGGGAAGCAAGGGCAAGGGTGTGAGGAAGATGAGAAGGAGGCAGAGGAGGAGGAGGATGTTAATGCCGTTGAAGATCAGCTCGGTGTCATTCGGGATAAAATAATGAGATGGGAGGAAGATCGGTCTATGATCTGGGATTCGGGACCTGAAGAAGCATTTGAGTATCTGAATGCTGCTAATAATGCCCGCCAATTGACTGATAAGTTGGAGAGTTTGCATTCGAATAAAGAGGACAAAATGTACGAGTTTTTGTCGAGGGCGTATGCGCTTCTTCAAAAAGCTATGTCAAGGCTTGAAGAAGAGTTCAGAAACTTGCTTTTCCAGAATAGGCAACCTTTCAAACCAGAATATGTACCTTCCCGATCGTGTGAAGAAGATGTTGTTGATGAGAACTCTATAGTTTCTTTAGGAGATGAAACAATTGAGGAATCACTTCAAGAAGATAGTGTTAGCAAAGACTCAGAGGAGCATCTCATTGATTTAGTGCATCCGGATGTGATCCTAGATCTCCGGTGTATTGCAAATTTATTGTTTGCTTCTAATCATGTCCGCGAATGTTCGCACATTTATACTATTGCCCGAAGGCTTGCTTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGTTGAATATCGAGGATGTGTTGAAGATGGAGTGGGTTACTTTGAATTCCGAAGTCAAAAGATGGGTTTGGGCTATGAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAGATGGCTTAGTGACCGGATTTTTGGGGAGGGTGAACCTGTTAGTGTAGTTTGTTTTGTTGATGCATCGAAGGCTTCAATATTGCAGCTTCTGAATTTCGGTGTAGCTATGTCTATTGGTCCTCATCAACCTGAGAAATTGTTCCTTTTTCTTGAAATGTACGAAGTTCTAGCAAACCTTATGCCAGACATCGATGCCTTGTATTCAGATGAGGTTGGCTCTTCGGTGAAAATTGATTGTCATGAGGTTCTAAAGAGATTAGGCAATTGTGTGAGGGCAACATTTCTCGAATTTGGAAATGCCATTGCATCAAATGCCTCATCAACCGCGCTTGTTGGCGGTGGAATTCACCCATTGACCGGATATGTTATGAATTATCTTAGGAATCTAACTGACTACAGCGACACGCTTAATCTGCTTCTGAAGGACCAAGAAGAAGAGAACCCGATTTCCCTGTCATCTGACTTGAGCCCCGGTACGAAAGAGGATAGCAAACGCCCGGGATCTCCAGTTAGAGTCTCCACAATGGCCCTTCGCATCAGATCATTTGCTTCAATCTTGGAATCAAAACTTAAGGACAAGTCCATGTTATACAAAGAGGTTCCCTTGCAGCACTTATTCTTGATGAATAACCTACATTATATGGCTGAAAAGGTTAAGGAATCTGAACTAAGTCGTATATTCGGCGATGAATGGATTCGAAAGTGTAACTCGAAGTTTCTGCAGCATGCAATGGACTACAAGAGAGCTAGTTGGAGTCCCATTCTCAACTTGCTTAAGGATGAAGGAATTCATGTTTCAGGTACGAATTCTATCTCAAAAACTCTTCCTAAGGAGAGGCTAAAAAACTTCTACCTCGGCTTCGAGGACATTTACAGGATCCAAACAGCTTGGCTTATCCCCGATGTTCAGCTTCGTAACGACGTGAGGATTTCTACATCCCTCCAAGTAGTCCAAGCCTATGTGTCATTTACTGGAAAGCATAAAAATCACATAAATGACAAACACAATAAATACACTGCTGATGATTTAGAAAACTACTTTTTCGATTTCTTCGAGGGACTTCAAAAATTGTTGCAACTTCCCCATAGGAAGTGA 2019 0.4215 MAVEESEVVIPELETEENLIATARHLVKALGSNSNLTSDAKKILADLGFQMCSINISGEKEEGKQGQGCEEDEKEAEEEEDVNAVEDQLGVIRDKIMRWEEDRSMIWDSGPEEAFEYLNAANNARQLTDKLESLHSNKEDKMYEFLSRAYALLQKAMSRLEEEFRNLLFQNRQPFKPEYVPSRSCEEDVVDENSIVSLGDETIEESLQEDSVSKDSEEHLIDLVHPDVILDLRCIANLLFASNHVRECSHIYTIARRLALDECLFILEMERLNIEDVLKMEWVTLNSEVKRWVWAMKIFVRVYLASERWLSDRIFGEGEPVSVVCFVDASKASILQLLNFGVAMSIGPHQPEKLFLFLEMYEVLANLMPDIDALYSDEVGSSVKIDCHEVLKRLGNCVRATFLEFGNAIASNASSTALVGGGIHPLTGYVMNYLRNLTDYSDTLNLLLKDQEEENPISLSSDLSPGTKEDSKRPGSPVRVSTMALRIRSFASILESKLKDKSMLYKEVPLQHLFLMNNLHYMAEKVKESELSRIFGDEWIRKCNSKFLQHAMDYKRASWSPILNLLKDEGIHVSGTNSISKTLPKERLKNFYLGFEDIYRIQTAWLIPDVQLRNDVRISTSLQVVQAYVSFTGKHKNHINDKHNKYTADDLENYFFDFFEGLQKLLQLPHRK 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1265 672 Pfam Exo70 exocyst complex subunit 290 655 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal22g1265 672 Coils Coil 143 170 - -
Lal22g1265 672 MobiDBLite consensus disorder prediction 457 477 - -
Lal22g1265 672 Gene3D Exocyst complex component Exo70 97 665 - -
Lal22g1265 672 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 23 666 - -
Lal22g1265 672 SUPERFAMILY Cullin repeat-like 104 660 IPR016159 -
Lal22g1265 672 MobiDBLite consensus disorder prediction 60 83 - -
Lal22g1265 672 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 666 IPR004140 GO:0000145|GO:0006887
Lal22g1265 672 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1265 Lal-Chr22 15008703 15010721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1265 12 672 EXO70 exocyst subunit family AT3G29400 44.510 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1265 K07195 - gmx:100799102 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1265 22 15008703 15010721 Lal22g1265 22 15008703 15010721 ECH
Lal22g1265 22 15008703 15010721 Lal6g1562 6 17982286 17984250 LSH