LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal22g1255	ATGGAGAAGGTTAGCCTAACCTATGGAATAGATGAATGTAATGGTAGTGAAGATGAAAATGTGAATGAAGTAGAGGGGTTAGATTTTGAAGAGATTGATTTTTCATTATTAAATGAAGATGAAGTGAAGAAATATCAGTTTTTAAACAATGATATCACTTACAAATTTTATAAGATGTATGCTATGAATAAAGGATTTGGCATTAGAAAATATCATACTCGGCGAGACAAGGATGGTGAAATTTTATGGCTATCATTTTTTTGTGATAAGGAAGGATTTGGAGATAAGAAAAATGAATTGGTTCGGAAGAGGGCGCCGAGAAGAGAGATTGGATGTGGTTATTTAGAAAGAATGAAAATCCACATTGACAAGGAAAAAGGGGATTTGTATGTTAGTTATTTTATTGATGAACATAATCATGAACTGGTCAGTGAACATTACGGTGCAATGATAACCTATAACCGAAGAATGACAGAGACGTATGTGGCTCAGATGAACATAATGATAGAAGTGGGCATTGGGACGGGAAAAATATTTGGTTCATTTGCTGGTCAATGTGGTAGATATCGGTATATTGGGTTCTCTAAGAAGGACATGTATAATCAAATTCAGAAGCAAAGAAGAATAGGAAATGGTGACGCGAAATCAGCATTACAATACTTGAAAGAGCAATCAAAATCAGATTGTGCAATGTGTTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGTTGATGAATGCAACATTTTTGACTACTCAATTTTTGGAGATGGTATTGCTTTTGATGCAACTTATGGTCGAAACAAATACAAGTTTCCAGGTGTCATTTTTTCTGGGTGA	855	0.345	MEKVSLTYGIDECNGSEDENVNEVEGLDFEEIDFSLLNEDEVKKYQFLNNDITYKFYKMYAMNKGFGIRKYHTRRDKDGEILWLSFFCDKEGFGDKKNELVRKRAPRREIGCGYLERMKIHIDKEKGDLYVSYFIDEHNHELVSEHYGAMITYNRRMTETYVAQMNIMIEVGIGTGKIFGSFAGQCGRYRYIGFSKKDMYNQIQKQRRIGNGDAKSALQYLKEQSKSDCAMCWRHSVDEEGKLQQLFWVDECNIFDYSIFGDGIAFDATYGRNKYKFPGVIFSG	284

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal22g1255	284	Pfam	FAR1 DNA-binding domain	55	143	IPR004330	-
	Lal22g1255	284	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	45	284	IPR031052	GO:0006355
	Lal22g1255	284	PANTHER	OS02G0262500 PROTEIN	45	284	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal22g1255	Lal-Chr22	14847539	14851434	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Lal22g1255		FAR1	2.8e-15	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal22g1255	-		-	lang:109327968	413.69