Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1086 ATGTTTCCAAAGGAAAATGGTAACGGCTACCACCACCACCACCACCACGAGGTTCCACCACCGGGAATGGGAAACGGAGACGGTGTCCGCCGTGTCACGCGCAGTTCACGCGCTTCCAGTCCCACTTCTACTTCTAGTGATACCGTTCCCGTCGTTAGGGTTCCTGAACAGCAGCAATTGCAACAACATCGCCCTCCTTGTACGGACTTCGACATGGCTTATTTCAATTCTTACTCTCACCTTGGTATCCACCAAGAAATGATTAAGGATCGTGTGCGGACTGAAACTTATAGGGAAGCAATCATGCGGCATCAGAGTTTTATTGCAGGCAAAAAAGAGAAAGCTGGAGACACTGCTGACATGTCATGGGTCTGTTTCGTCCCTTTCCAATCATCACTCAAACCTTGTCTACCCTCCCGTCTTCTTATTCCAATTCACTATCAGAATCATGCCCCATGTGTGGAGGTTGTACTTGATGTGGGATGTGGTACTGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTACGCCGTTGATGCAAGTGACATTGCCCTGAAGGCAAATGATATTGTGGAAGAAAATAATCTGTCTGATGTTGTAATCGTATTACATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCTGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTACGGCCAGAGATCGCTGGCTCAAACCTGGTGGTCTTATTCTTCCTTCAAATGCATCGTTGTACATGGCTCCTGTAACACATGCTGACAGATATAGTGAATACATCGATTTCTGGCGCAACGTGTATGGAATTAATAGTGAGTGTATTACTTGGGTTCAGCATCCTGAAGTGGGATCTGCAGTGGGTTCTGGCCCACGCCTCTGCTTCAACTCAACCCCCGACGGGCGCGACGGCCAGCCGCACCGCTATGCGCCATTCCGTCGCAGGGAGGGACAGAAACCTCTACAACCTCCGCTATCGCGTGCTTTCGACTACCCAGTGTCTCCGATGATATCATTAGCAAAACAGTCTGCATCTGAAGAACCTTCTGTGGAGACAATAACTGGTGAAAATATTTTGACATGGCCACATGAGGTAAAATACATTGATTCTTATTCTATTACCATCCACGAGCTAGAAACTATAACATCAAGCTTTAAGTTCAATTCAATGATGCGGGCATCATTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTAACGGGCCTGCAATATCACCAATCGATTCTCATTCAACTCCATCTAGTGACAATAATTTGGCGAATGGTAGTCAGCGAAAAAAGAGGAGAAATCCTAATGATGCACTGGTCCTGTCCACTGCACCTGAGAACCCTCCAACGCATTGGCAGCAGACATTGATTTACTTCTATGAGCCAGTAGCACTGGAACAAGATCAACCGATTGAAGGTTCAGTCACATTGTCACAAAACAAAGAAAACGCTCGATTCATTAACATTAACCTTGAATATTCTGTTGGTGGTCGATCCTACGTGAAACAATCTGTTATGAAATGA 1581 0.4522 MFPKENGNGYHHHHHHEVPPPGMGNGDGVRRVTRSSRASSPTSTSSDTVPVVRVPEQQQLQQHRPPCTDFDMAYFNSYSHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKKEKAGDTADMSWVCFVPFQSSLKPCLPSRLLIPIHYQNHAPCVEVVLDVGCGTGILSIFCAQAGAKRVYAVDASDIALKANDIVEENNLSDVVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNASLYMAPVTHADRYSEYIDFWRNVYGINSECITWVQHPEVGSAVGSGPRLCFNSTPDGRDGQPHRYAPFRRREGQKPLQPPLSRAFDYPVSPMISLAKQSASEEPSVETITGENILTWPHEVKYIDSYSITIHELETITSSFKFNSMMRASLHGFAFWFDVEFNGPAISPIDSHSTPSSDNNLANGSQRKKRRNPNDALVLSTAPENPPTHWQQTLIYFYEPVALEQDQPIEGSVTLSQNKENARFININLEYSVGGRSYVKQSVMK 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1086 526 MobiDBLite consensus disorder prediction 1 52 - -
Lal22g1086 526 CDD AdoMet_MTases 157 256 - -
Lal22g1086 526 Gene3D - 259 304 - -
Lal22g1086 526 PANTHER BNAC03G41340D PROTEIN 15 111 - -
Lal22g1086 526 PANTHER BNAC03G41340D PROTEIN 349 523 - -
Lal22g1086 526 PANTHER BNAC03G41340D PROTEIN 155 289 - -
Lal22g1086 526 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 71 526 IPR025799 GO:0016274|GO:0018216
Lal22g1086 526 Gene3D Vaccinia Virus protein VP39 69 257 IPR029063 -
Lal22g1086 526 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 15 111 IPR025799 GO:0016274|GO:0018216
Lal22g1086 526 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 349 523 IPR025799 GO:0016274|GO:0018216
Lal22g1086 526 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 155 289 IPR025799 GO:0016274|GO:0018216
Lal22g1086 526 Gene3D - 342 525 - -
Lal22g1086 526 MobiDBLite consensus disorder prediction 429 466 - -
Lal22g1086 526 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 519 IPR029063 -
Lal22g1086 526 MobiDBLite consensus disorder prediction 312 340 - -
Lal22g1086 526 MobiDBLite consensus disorder prediction 429 444 - -
Lal22g1086 526 MobiDBLite consensus disorder prediction 32 52 - -
Lal22g1086 526 Pfam Ribosomal protein L11 methyltransferase (PrmA) 155 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1086 Lal-Chr22 9789953 9804658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g1086 74 484 C2H2 Transcription Factor Family AT3G12270 30.496 2.23e-47 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1086 K11437 - osa:9268644 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1086 22 9789953 9804658 Lal6g1189 6 9303143 9326262 LSH