Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal22g1057 | ATGAGAAGTTGCAGCAACATTTCAAACAGGCAGCATGTATTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAAATTGACTGGAGCTATATAGAATTCGTTGATAATCAGGATGTTCTTGATCTCATAGAGAAGATTCTCTGCCGAAACAATCAGATTGGTTATCCTGGCTATGCCGGACTAATCCCCGGGCCTGTAGCAGGCAACGTGAACACTACAGTTTCCTTCACTAGGACTCGAACTGATGATCTGAAACCGGCGGCATTATTGCTCTTATGGATGAGGCCTGGTATTATGTTTCCAAGATCAACTAATGAAATATTTGCCGGAAAGCTATATCAAACATTTAAAGACAATAAACGCTTGAGCAAGCCAAAGCTGTCTCGATCTGACTTCACGGTCACTTATCAGACAGAGTTGTTCCTTGATAAAAATAAGGACTATGTTGTTCCAGAGCATGCGGCCCTACTCAGTGCTTCAAATTGCTCCTTTGTTTCTGGGTTATTCCCACCTTTACCAGAGGACACTACAAAATCAACAAAGTTCTCTTCTGTAGCCACTCAGTTTAAGCAACAACTACAATCTTTGCTTGAAACACTGAGTGCTACTGAGCCACACTACATTCGTTGTGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTTGAGAACATTAACGTGTTGCAGCAGCTTCGATTTAGGGGAGTAATGGAGGCAATTCGGTTAATGAAATCAGCTATTCAAAGCCCTGAAGATTTGACAGCTTGTAATAGGATTCTAGATAAAGCAAACCTTAAAGATTATCAGATTGGAAAAACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCTGAGGTCTTAGGAAGATCCGCAACTGTTATTCAAAGAAATGGTCGCACATATATTTGTAGGAGATATTACGTTTCATTGCGGTTGTGTGCCATAGAACTACAAAGGGTCACCAGAGGTATTCAAGGGATGGTATCCAGGAATGACCTTAGAATCAGGAAACGTTTTCTTAGTCACTCGAGAGGTTATTTAGCTCGCACTCGTTTCAGAAGGCTAAAGAAAGCAACAATTGTCGTACAATGTTCCTGGAGAAGAACATTTGCACGAAGAGAACTTCGAAAGCTGAAAATGTATGTTGGCTCATCTTTGGATAAACTCAAACACGCAACGCATGCCGTTAGATTCCTGGTCGTACGGCAAAAGAATGGACTATCTTATGATGATCTTACAAATGACCTCTGTCCTGTCACTACTAGCTTGAAGTTTCTAATGACATATGATGAAGAAGGTGATAGCAAATCCTTCTTGTTGGAAGACAATTCAAGTATTCCTATAATAGTTGAAGAGATTTCTAGTTCCCTTAAAGAGAATACCATTCCAAAAGTAAAACCTCCTGCAGATCTTCTTCAGAATCCAGCCTTCCACTTTTTACTTGATTATAGGTAG | 1473 | 0.4019 | MRSCSNISNRQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKILCRNNQIGYPGYAGLIPGPVAGNVNTTVSFTRTRTDDLKPAALLLLWMRPGIMFPRSTNEIFAGKLYQTFKDNKRLSKPKLSRSDFTVTYQTELFLDKNKDYVVPEHAALLSASNCSFVSGLFPPLPEDTTKSTKFSSVATQFKQQLQSLLETLSATEPHYIRCVKPNNLLKPGIFENINVLQQLRFRGVMEAIRLMKSAIQSPEDLTACNRILDKANLKDYQIGKTKVFLRAGQMAELDACRAEVLGRSATVIQRNGRTYICRRYYVSLRLCAIELQRVTRGIQGMVSRNDLRIRKRFLSHSRGYLARTRFRRLKKATIVVQCSWRRTFARRELRKLKMYVGSSLDKLKHATHAVRFLVVRQKNGLSYDDLTNDLCPVTTSLKFLMTYDEEGDSKSFLLEDNSSIPIIVEEISSSLKENTIPKVKPPADLLQNPAFHFLLDYR | 490 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal22g1057 | 490 | SMART | MYSc_2a | 1 | 291 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lal22g1057 | 490 | ProSiteProfiles | IQ motif profile. | 361 | 390 | IPR000048 | GO:0005515 | |
| Lal22g1057 | 490 | PANTHER | MYOSIN | 329 | 387 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN | 425 | 487 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN | 10 | 45 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN | 387 | 427 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN | 249 | 329 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN | 96 | 242 | - | - | |
| Lal22g1057 | 490 | Gene3D | Kinesin motor domain | 204 | 242 | IPR036961 | - | |
| Lal22g1057 | 490 | Gene3D | - | 292 | 342 | - | - | |
| Lal22g1057 | 490 | Gene3D | - | 343 | 387 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN HEAVY CHAIN | 249 | 329 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN HEAVY CHAIN | 425 | 487 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN HEAVY CHAIN | 10 | 45 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN HEAVY CHAIN | 96 | 242 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN HEAVY CHAIN | 329 | 387 | - | - | |
| Lal22g1057 | 490 | PANTHER | MYOSIN HEAVY CHAIN | 387 | 427 | - | - | |
| Lal22g1057 | 490 | Gene3D | - | 243 | 288 | - | - | |
| Lal22g1057 | 490 | ProSiteProfiles | Dilute domain profile. | 273 | 480 | IPR002710 | - | |
| Lal22g1057 | 490 | Pfam | IQ calmodulin-binding motif | 295 | 313 | IPR000048 | GO:0005515 | |
| Lal22g1057 | 490 | Pfam | IQ calmodulin-binding motif | 363 | 382 | IPR000048 | GO:0005515 | |
| Lal22g1057 | 490 | Pfam | Myosin head (motor domain) | 11 | 45 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lal22g1057 | 490 | Pfam | Myosin head (motor domain) | 99 | 245 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lal22g1057 | 490 | SMART | iq_5 | 292 | 314 | IPR000048 | GO:0005515 | |
| Lal22g1057 | 490 | SMART | iq_5 | 333 | 359 | IPR000048 | GO:0005515 | |
| Lal22g1057 | 490 | SMART | iq_5 | 360 | 382 | IPR000048 | GO:0005515 | |
| Lal22g1057 | 490 | Gene3D | - | 97 | 203 | - | - | |
| Lal22g1057 | 490 | Gene3D | - | 11 | 45 | - | - | |
| Lal22g1057 | 490 | ProSiteProfiles | Myosin motor domain profile. | 1 | 245 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lal22g1057 | 490 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 10 | 319 | IPR027417 | - | |
| Lal22g1057 | 490 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 345 | 388 | IPR027417 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal22g1057 | Lal-Chr22 | 9363052 | 9373759 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal22g1057 | 385 | 486 | Myosins gene family | AT5G43900 | 37.405 | 3.36e-14 | 73.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal22g1057 | K10357 | - | gmx:100788123 | 469.544 |