Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0999 ATGATGAAGAATACTAATGGTCATGACAATAATTCTAAGAAAGAAAGAGTTGTTTGGTCACAAGACTTACACCGCAAGTTTATTGTTGCTGTTAATCACTTAGGAGGAATTGATAAGGCTGGACCTAAAAAAATTCTAGCATTGATGAAGGGTGAAAAGCTGACAAAGGAGAATGTGGCCAGCCATCTACAGAAGTATAGACTTCATCTTAAAAGAATTAGCAGCACTTTTGAGCCAAACCAAGAGGGTTCTATGCAGTTTCATGACATTAGTGATGCTGCTGTTCAGAATGGTTATCACAGTGGTGTTAGTCTAGCAATACCAACATCAGAAAGGTATTCCAATCAAGGACCTGACTCATTGTTCAACGATACTTCATTTCAATGGTTGGATGACAATGGAAAATGGGACTTTAATTTTTGTGAATGGGATCATGGAAATGGTATCATGGAACTAAGGGAAGAAAACTCTTCATTGATGGAACAACGTCAGGGGTACTTCAGGAACCAACAACACCAGTATCAAAGCATCTGTGTGGCTGCTAACCCTGGTTTAGTACAAGACTCGGTCACTCCATCTTCTGGCTGCAGCTCTGGTGACTTACATGGGATTGCTGAGCTGAGGCACGAGATGGCAGCCATCAGACACGAGAATGGTCAATTGAGGGAGATTGTCCATGCTATGAAGGCACAACAGGACATGTTGGTGCAGGTTGTCTTACAGAGAACAATCGTCTAG 738 0.4173 MMKNTNGHDNNSKKERVVWSQDLHRKFIVAVNHLGGIDKAGPKKILALMKGEKLTKENVASHLQKYRLHLKRISSTFEPNQEGSMQFHDISDAAVQNGYHSGVSLAIPTSERYSNQGPDSLFNDTSFQWLDDNGKWDFNFCEWDHGNGIMELREENSSLMEQRQGYFRNQQHQYQSICVAANPGLVQDSVTPSSGCSSGDLHGIAELRHEMAAIRHENGQLREIVHAMKAQQDMLVQVVLQRTIV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0999 245 Pfam Myb-like DNA-binding domain 16 67 IPR001005 -
Lal22g0999 245 SUPERFAMILY Homeodomain-like 12 72 IPR009057 -
Lal22g0999 245 Coils Coil 204 224 - -
Lal22g0999 245 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 69 IPR006447 GO:0003677
Lal22g0999 245 Gene3D - 11 74 - -
Lal22g0999 245 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR24 4 94 - -
Lal22g0999 245 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 94 IPR045279 GO:0009736
Lal22g0999 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 71 IPR017930 -
Lal22g0999 245 Coils Coil 149 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0999 Lal-Chr22 8478566 8479989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0999 13 74 Response Regulator Gene Family AT2G25180 70.968 2.58e-21 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal22g0999 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0999 - K14491 lang:109350585 304.293