Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0978 ATGGAAATAGATTCTTCTACTACCAAGTTGAAGAGTGTTGGGCTAGGAATGGATTTGCCTATCATGCATGATAGTGATAGGTTTGAGCTTGTCCGTGATATTGGGTCTGGAAATTTTGGTGTGGCAAGGCTCATGAGAGACAAGCACACTGAAGAGCTTGTTGCTGTTAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACAGAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTCATATTAACGCCTACGCATTTGGCTATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGGAGGTTCGGTGAGGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGTGACCTGAAGTTGGAGAACACATTGCTAGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGGTATTCGAAGGTATACTTCTTTCTTCGCACTACTTCTACCCGTAGGTACCTTGAGTCCTCAGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATACATTGCTCCTGAAGTTCTGCTTAAGAAAGAATACGATGGCAAGATTGCCGATGTGTGGTCTTGTGGTGTCACCTTATATGTCATGTTGGTTGGAGCCTATCCTTTTGAGGATCCCGAAGAACCTAAAAATTTCCGGAAGACAATTCATAGGATTTTGAAAGTCCAGTACTCAATTCCCGACTATGTTCATATATCTCCCGAGTGTCGTCATCTGATCTCAAGGATATTCGTTGCTGATCCTTCGAAAGTCAGTTTGTTTTCTTTACTATTTTCATCAAAGATGATATCATTATTCTTTCAATTGGAAACTAATATTGCTTTACAACAGAGAATAAATATTCCTGAGATTAGAAATCATGAGTGGTTTTTGAAGAACCTTCCGGTTGATCTCATGGTTGAGAATACAATGAACAACCAGTTTGAGGAGCCTGATCAGCCAATGCAGAGCATTGAAGAAATCATGCAGATAATTAGTGAGGCTACAATTCCTGCAGCCGGAACTCAATCGTCTCTTAACCAGTATCTCACTGGTAGCTTGGATATTGATGATGACATGGACGAGGACCTAGAGACTGATCCCGACCTCGATATTGATAGCAGTGGAGAAATAGTTTATGCGCTGTAA 1236 0.4126 MEIDSSTTKLKSVGLGMDLPIMHDSDRFELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFGEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKVYFFLRTTSTRRYLESSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILKVQYSIPDYVHISPECRHLISRIFVADPSKVSLFSLLFSSKMISLFFQLETNIALQQRINIPEIRNHEWFLKNLPVDLMVENTMNNQFEEPDQPMQSIEEIMQIISEATIPAAGTQSSLNQYLTGSLDIDDDMDEDLETDPDLDIDSSGEIVYAL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0978 411 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 18 286 - -
Lal22g0978 411 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 312 406 - -
Lal22g0978 411 Gene3D Phosphorylase Kinase; domain 1 9 103 - -
Lal22g0978 411 ProSiteProfiles Protein kinase domain profile. 28 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0978 411 PANTHER SERINE/THREONINE KINASE 312 406 - -
Lal22g0978 411 PANTHER SERINE/THREONINE KINASE 18 286 - -
Lal22g0978 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lal22g0978 411 SMART serkin_6 28 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0978 411 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Lal22g0978 411 Pfam Protein kinase domain 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0978 411 Gene3D Transferase(Phosphotransferase) domain 1 104 334 - -
Lal22g0978 411 SUPERFAMILY Protein kinase-like (PK-like) 19 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0978 Lal-Chr22 8204722 8208003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0978 27 337 CBL-interacting serine-threonine protein kinases AT5G25110 39.308 1.24e-63 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lal22g0978 Pkinase 7.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0978 K14498 - gmx:100804702 641.728