Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0891 ATGGAACAAGATTGGGATCTCTATGCCGTGGTAAGAGGTTGCTCCACCGTGACCTCTTCCACCACCACCACCACAGCTACAACCTCTTCTACTTCTTCATCTACTTTTGCAACTTGTTACAATCCTGCAGCATCTTCTTCATGTCAAAGTTTGTCCATTTCAAACCCCTTTGAAGCAAAGAATTCTTCCATTGAAGAATTGCATGAACTTTGCAAGCCTTTCTTTCTCAAATCACACCCTTCACCATCTTCATCTTCATTTCAAACCTCTTCTCCTATCTCTTCCTTCTCTTATTCTCCCTCTTCACCAAAACCAAGGCACACACAACCAAAACAACAGCCTCATCATTATGCTGGTTCTGCTACCACCCCAAGATCTAAAAGAAGGAAGAATCAGCTTAAGAAAGTTTGTCAAGTGGCAGCTGAAAATCTCTCCTCAGATATTTGGGCATGGAGGAAATATGGACAGAAACCAATTAAAGGGTCACCATATCCAAGGGGATATTATAGATGCAGCAGTTCAAAAGGGTGTTTGGCTAGAAAACAAGTAGAGAGGAATAGATCTGAGCCAACAATGTTTATAGTAACATACACTGGTGAGCACAACCACCCTGCTCCAAGTCATAGAAACTCTCTTGCTGGATCCACTAGACAGAAGCCACTAACACCAGAAACAGCCACTGGTGAAGAATCTGATAAACTATGTGCAAAAACCACTTCTCCAGAGACCTCAGGAGCAGAAGAAGAGGTTGAATTAGGAACAAAGTCAGAGAGCAAAGAGGATATTGAAGAGTTGATGAATGATGATGAGGAAGAAAATGAATTTGGGTTGCCTGATATGGTGCTGAATGATGATTTCTTTGAAGGTTTAGATGAATTGACAGGGTCTATTGCATCACCTAATGGAGTATGTTTTGGTGATCCTTTTCCAGATAGTGTTTCTCTTCCTACTTGA 954 0.4151 MEQDWDLYAVVRGCSTVTSSTTTTTATTSSTSSSTFATCYNPAASSSCQSLSISNPFEAKNSSIEELHELCKPFFLKSHPSPSSSSFQTSSPISSFSYSPSSPKPRHTQPKQQPHHYAGSATTPRSKRRKNQLKKVCQVAAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSEPTMFIVTYTGEHNHPAPSHRNSLAGSTRQKPLTPETATGEESDKLCAKTTSPETSGAEEEVELGTKSESKEDIEELMNDDEEENEFGLPDMVLNDDFFEGLDELTGSIASPNGVCFGDPFPDSVSLPT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0891 317 SUPERFAMILY WRKY DNA-binding domain 141 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal22g0891 317 MobiDBLite consensus disorder prediction 203 225 - -
Lal22g0891 317 ProSiteProfiles WRKY domain profile. 140 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0891 317 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 316 IPR044810 GO:0003700
Lal22g0891 317 MobiDBLite consensus disorder prediction 297 317 - -
Lal22g0891 317 Pfam WRKY DNA -binding domain 147 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0891 317 SMART WRKY_cls 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0891 317 MobiDBLite consensus disorder prediction 84 126 - -
Lal22g0891 317 MobiDBLite consensus disorder prediction 248 262 - -
Lal22g0891 317 MobiDBLite consensus disorder prediction 84 134 - -
Lal22g0891 317 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 316 - -
Lal22g0891 317 MobiDBLite consensus disorder prediction 200 270 - -
Lal22g0891 317 Gene3D WRKY domain 129 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0891 Lal-Chr22 6973640 6975543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0891 1 293 WRKY Transcription Factor Family AT4G01250 47.525 7.02e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal22g0891 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0891 K13425 - gmx:100798084 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0891 22 6973640 6975543 Lal2g0952 2 6378966 6380798 ECH
Lal22g0891 22 6973640 6975543 Lal9g0840 9 6133025 6134809 ECH
Lal22g0891 22 6973640 6975543 Lal22g0891 22 6973640 6975543 ECH
Lal16g1186 16 8155791 8157557 Lal22g0891 22 6973640 6975543 ECH
Lal6g0997 6 7112653 7114535 Lal22g0891 22 6973640 6975543 LSH
Lal6g0997 6 7112653 7114535 Lal22g0891 22 6973640 6975543 PCT
Lal22g0891 22 6973640 6975543 Lal6g0997 6 7112653 7114535 PCT