Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0881 ATGCCATTTCCCGATGCAGCTTCCATATTCATGGACGTACCAATAGCTGCCTCCGTCTTCGGAATTCGTCTCCGGCTACTCATCATAATAATTCTCATCTCCTTAGTTTTCCTCACCTTCTTCCTCCTCACCCTCTGCTTCATCTACCATCGCAACCGTAACCGTAATCGCGACCGCGCACCCTCCGACTCATTGGAAATAGAAGATTTAGTCCACGTGGAAACGGGGTCGGAGGTGTCGCATATTGGGTTGGGGAGGTGGTATACGTTGAGGGAGCTTCAAGTTGCGACTGATGGGTTATGTGAATCGAATGTGATTGGTAAAGGTGGTTATGGAATTGTCTATCGTGGTATTCTTCCTGATGGGACTAATGTTGCTGTTAAGAATCTCTTTAATAAGCCAGAAGCTGAGAGAGATTTTAAAGCAGAGGTAGAAGTAATTGGTCGTGTGCGGCACAAGAATCTTGTTAGGTTGCTTGGATACTGTGTTGAGGGGCCATACATGATGCTTGTGTATGAATATGTTGACAATGGTAGTCTTGATCAATGGCTGCATGAGAATGTTGCATCCATAAGCCCTTTGACATGGGATATCCGCATGAACATTATGTTGGGCACAGCAAAAGAATTGGCTTATCTTCACGAGGGTCTTGAACAAAAAGTCGTTCACCGAGACGTGAAATCAAGCAACGTACTCCTCGATAGCGAATGGAACTCAAAGGTTTCTGATTTTGGGCTTGTTAAGCTTATGTGTACTGACCATAGTTATGTCACAACTCGAGTGTTGGGGACATTTGGTTATGTTGCCCCAGAGTATGCTTCCACTGGAATGCTGAATGAGAAGAGTGATGTTTATAGCTTTGGGATGCTTATCATGGAAATAATTACTGGGAGAAGTCCTGTTGATTATAGCAGACCAAAAAGACAGATTAATTTAATAGGGTGGTTAAAAACTCAGTTTGAGAATAAAAAAACTGAGGAAATAGTTGATCCTAAGCTCCCTGAGAAGCCAACTCCTGGGGCTCTTAAACGTGCTCTAATGGTTGCTATTCGATGTGTTGATCCTGATCCGACGAAGAGGCCTAAAATGGGTAATGTGGTCCACTTGCTTGAGTCTGATGACCTCTTCCTTCATGGACGAAGAGTCGATGGGGAATATTCTAGTTCCGATATTGATTATCAACAAGAGCATGGGGACTCAAGTTTAGATAAAAGGCCAATAGGTGAAGAGATCACTGCTCAAAGGGAAGATGATAGTGATGGTAATTATGAACTGGAGCATAAGGACTCAAGTTTAGATAAAAAGCTAAAAAGTGGAGAGATCACTGATCAAAAGGAAGGTAATAGTGATTACCAACAGGAGCATAAGGACTCAAGTTTAGATAAAAAGCCAATAGGTAGAGAGATCACTGATCAAAGGGAAAATGATAGTGGTGGTGATTATCAACAGGGGCATAAGGACTCAAGTTTAGATAAAAAGCCAATAGGTAGAGAGATCACTGATCAAAGGGAAAATGATAGTGGTGGTGATTATCAACAGGAGCATAAGGACTCAAGTTTAGATAAGAACTCAATAGGTGGAGAAAATCACCATAAGCCAACTAGGTGA 1608 0.4229 MPFPDAASIFMDVPIAASVFGIRLRLLIIIILISLVFLTFFLLTLCFIYHRNRNRNRDRAPSDSLEIEDLVHVETGSEVSHIGLGRWYTLRELQVATDGLCESNVIGKGGYGIVYRGILPDGTNVAVKNLFNKPEAERDFKAEVEVIGRVRHKNLVRLLGYCVEGPYMMLVYEYVDNGSLDQWLHENVASISPLTWDIRMNIMLGTAKELAYLHEGLEQKVVHRDVKSSNVLLDSEWNSKVSDFGLVKLMCTDHSYVTTRVLGTFGYVAPEYASTGMLNEKSDVYSFGMLIMEIITGRSPVDYSRPKRQINLIGWLKTQFENKKTEEIVDPKLPEKPTPGALKRALMVAIRCVDPDPTKRPKMGNVVHLLESDDLFLHGRRVDGEYSSSDIDYQQEHGDSSLDKRPIGEEITAQREDDSDGNYELEHKDSSLDKKLKSGEITDQKEGNSDYQQEHKDSSLDKKPIGREITDQRENDSGGDYQQGHKDSSLDKKPIGREITDQRENDSGGDYQQEHKDSSLDKNSIGGENHHKPTR 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0881 535 ProSiteProfiles Protein kinase domain profile. 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0881 535 Gene3D Phosphorylase Kinase; domain 1 72 174 - -
Lal22g0881 535 SUPERFAMILY Protein kinase-like (PK-like) 78 371 IPR011009 -
Lal22g0881 535 ProSitePatterns Protein kinases ATP-binding region signature. 106 128 IPR017441 GO:0005524
Lal22g0881 535 Pfam Protein kinase domain 104 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0881 535 MobiDBLite consensus disorder prediction 387 535 - -
Lal22g0881 535 PANTHER OS03G0125600 PROTEIN 75 399 - -
Lal22g0881 535 Gene3D Transferase(Phosphotransferase) domain 1 175 379 - -
Lal22g0881 535 SMART serkin_6 100 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0881 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Lal22g0881 535 PANTHER OS01G0323000 PROTEIN 75 399 - -
Lal22g0881 535 CDD STKc_IRAK 106 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0881 Lal-Chr22 6849712 6852711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0881 26 372 Trihelix Transcription Factor Family AT5G38560 38.320 8.36e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lal22g0881 Pkinase 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0881 - - lang:109356070 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0881 22 6849712 6852711 Lal18g0484 18 4018113 4020457 LSH