Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0878 ATGCCTGTTGTTGATTCAACTGAGCATAACATTAGAGGAGTACCCACTTATGGTGGACGCTATGTTCAATACAATCTCTATGGCAACCTTTTTGAGGTTTCCACAAAATATGTTCCTCCAATTCGCCCAGTTGGTAGAGGCGCTAATGGTATTGTTTGTGCTGCTGTAAATGCGGAGACAAGTGAGGAAGTTGCCATTAAGAAGATTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATAAAACTTCTTCGGCACATGGATCATGAAAATGTGATGTCCATTAATGATATTATACGACCTCCACAGATGGAGAATTTCAATGACGTGTATATTGTTTCTGAGTTAATGGACACGGATCTGCATCAAATAATACGTTCCAATCAATCATTGACTGATGATCATTGCCGGTTGTTACGGGGGCTCAAATATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTACTGAATGCGAACTGTGACCTTAAGATTGGAGACTTTGGTCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTATGTCGTTACTCGGTGGTACCGAGCTCCAGAATTGCTTCTTAATTGTTCGGAGTATACGTCAGCCATTGATATATGGTCTGTCGGTTGCATACTTGGTGAAATCATGACAAAACAACCCCTCTTTCCTGGCAAAGATTATGTTCATCAACTGAGACTGATCACAGAGCTAATAGGTTCACCTGATGACACCAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGGTATGTAAGACAACTTCCACAATATCAAAAGCAAAACTTCTCTTCTAGATTTCCCAACATGTCTCCAGATGCTGTTGATTTGTTAGAGAAGATGCTTATCTTTGATCCAAAAAGGCGGATTACAGTTGATGAGGCTTTGTGTCACTCATACATGGCACCACTCCATGATATCAACGACGAACCTGTTTGCCCCCGACCTTTCAATTTTGACTTTGCGCGACCATCATTCACCGAAGAAGATATCAAGGAACTCATCTGGAGAGAGTCTGTGAAGTTCAATCCTGATCCACCAATTTACTGA 1104 0.4103 MPVVDSTEHNIRGVPTYGGRYVQYNLYGNLFEVSTKYVPPIRPVGRGANGIVCAAVNAETSEEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVMSINDIIRPPQMENFNDVYIVSELMDTDLHQIIRSNQSLTDDHCRLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDIWSVGCILGEIMTKQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDNARRYVRQLPQYQKQNFSSRFPNMSPDAVDLLEKMLIFDPKRRITVDEALCHSYMAPLHDINDEPVCPRPFNFDFARPSFTEEDIKELIWRESVKFNPDPPIY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0878 367 CDD STKc_TEY_MAPK 31 362 - -
Lal22g0878 367 SUPERFAMILY Protein kinase-like (PK-like) 41 327 IPR011009 -
Lal22g0878 367 ProSiteProfiles Protein kinase domain profile. 38 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0878 367 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 366 - -
Lal22g0878 367 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 366 - -
Lal22g0878 367 ProSitePatterns MAP kinase signature. 73 171 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal22g0878 367 Gene3D Transferase(Phosphotransferase) domain 1 122 346 - -
Lal22g0878 367 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Lal22g0878 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Lal22g0878 367 SMART serkin_6 38 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0878 367 Pfam Protein kinase domain 42 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0878 367 Gene3D Phosphorylase Kinase; domain 1 21 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0878 Lal-Chr22 6826391 6832035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0878 12 362 MAP Kinase Gene Family AT4G01370 85.112 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal22g0878 Pkinase 9.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0878 K20600 - gmx:100786554 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0988 6 7022311 7029218 Lal22g0878 22 6826391 6832035 LSH