Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0862 ATGGCACTTAACATAAACACACCCTCTTCTTCTTCTCCTCCTTCTATCCTAACCACACAATGGACCAACCATGTATTCTTGAGTTTCAAGGGTGATGACACTCGCAAAGGCTTCACTGACCATCTTTTTGCTTCTCTTGAAAGAAAAGGTATCAAAACATTCAAGGATGATCATGGCCTTCAAAAGGGTAAAGTGATATCATTAGAACTCATCAAAGCCATTGAAGAGTCAATGTTTGCACTCATCATTCTCTCACCAAACTATGCTTCCTCTACTTGGTGTTTGGATGAGGTTCAAAAGATTGTTGAGTGCAGCAAAAGTTTTGGTCAAACATTTTTCCCTATCTTCTATGGTATTGAACCTTCTGATGTAAGGCATCAGAAAGGAACCTTTGCCAAATATTTCAATAAACATGAGAAGAGATTCAAAAATCAAAGAGGGAAGGTGGAAAAGTGGAGAAATGCATTAACAGAAGTTGCAAATCACTCTGGTTGGGACTCCAAGGATCAACATGAGGCAGCACTTGTTGAAGCAATTGTGGACCACATGCATAAAAAAGTGATTCCTAGATTGCCATATTGCGCAGATAACCTTGTTGGGATTGATTACAGGATGGAGAAAGTGAATTCACTAATAGGAATGGGGCTGAATGATGTTCGGTTTATCGGCATATGGGGCATGGGAGGGATAGGTAAAACATCCATTGCTAGATTAGTGTATGAAGTGATCAAAGAGCATTTCAAGGTTAGTTGCTTTATTGAGAGCATTAGAGAGGTTTCTGAGACAAATGGTTTAGTTCACATCCAGAGGGAACTTCTTTCTCAACTTAATATAAGAAGTGGTGTTTTTTCCAATTTGTATGATGGGAAAAAGATAATAGCTAACTCTTTATGCAACAAAAAGGTTCTTCTTGTTCTTGATGATGTAAGTGAATTGAAACAGCTAGAGAATTTGGCTTTGAAGCAAGAATGGTTTGGTCCAGGAAGCAGAGTAATAATCACAACCAGAGATAAGCATCTTCTGCACATACATGGAGTGCATAAAACTTGTAAGGTTGGAGGCTTAACTGAAAAAGAAGCCCTTCAGCTATTTTGTTTGAAAGCCTTTAAACAAGATCAACCGGAAGAAAAGTATCGGAGTTTGTGCGAAGAAGTGGTTGAATATGCAAGAGGCCTTCCATTGGCACTTGAGGTATTGGGTTCCCATCTTCATGGAAGAACTGTTGAGGTTTGGCACAGTGCTATCAAACAAGTAAGAAGTGCTCCACACTCCAAAATCCAAGATACACTGAAAATAAGTTATGACGGTTTAGAACTCATGGAAAAAAATTTGTTTCTAGATATTGCATGTTTCTTCAAAGGGATGGGCAAAGAAGAAGTACTAGAAATACTAGAAAAATGTGGCCATTGTTCCAAAATTGGAATTGAAATTTTGATTGAAAGATCTTTGGTTACACTAGATTGGAAAGACAAGTTGGGGATGCATGATTTGATTCAAGAAATGGGAAGGAAAATTGTAGTTGAAGAATCTCCAGATGATCCCGGTAGACGTAGTAGGTTGTGGTCTCGAGAAGATATCGATCATGTATTGACAAAAAACAAGGGAACTGATGCAATTCAAGGTATAGTTTTGAACTTAGTTGAACCACATCAAGCATACTGGAACACCGAAGCTTTCTCGAAGATAAGTCGGCTAAGATTACTCAAGTTATGTCAAATGCAACTCCCTCTTGGTCTCAACTGCCTTCCTTGTGAACTAAAAGTTCTTCACTGGAAAGGATGTCCTTTGAAAACTCTGCCAGTAACCAATCAACTCGATGAAGTTGTTGACCTCAAATTGCCTTACAGCGAAATAGTCCAACTTTGGCATGGAACAAAGTTTCTAGAAAAGCTGAAGTCTATCGATTTGAGTTTTTCGATGAACCTAAAGCGATCCCCTAACTTCAGTGGGGTTCCGAATCTTGAGTCATTGGATCTTGAAGGTTGTAAAAGCTTAACTGAGGTTCATCCAACCGTTGCATTCCTCAAGAAAATTGTTCTGTTGAATTTAAAAGACTGCAAAAGGCTCAAATCTCTTCCAAGCAAATTGGATATGAGTTCCTTGAAGAATATAAATCTTTCTGGTTGCTCGGAATTCAAAGTTGTTCCAGAATTTGGTGAAAGCATGCAACATCTATCAATGCTTTCTTTAGAGGAGACTGCTATAACAAAGCTACCCTCATCACTGGGAAATCTCGTTGGCCTTACTTATTTAGAATTACAAAATTGCAAGAATCTTGTTTGCCTTCCAGATACAATTCATAAATTGAAGTCCCTCATAGTTCTGAATGTTTCTGGCTGCTCAAAACTCGGAAGCTTACCGGAGGGATTAAAGGAAATCGAGTGTTTGGAGGAACTTTGTGCAAGTGGAACTGCTATTGAAGAACTACCTTCATCTGTCTTTCATCTAGAAAATCTGAGAGAAATGTCATTTTCTGAATGCAAAGGGCCAGTATCTAAGTCAGCCAATATGTTTTCCCCCTTTAAGTGGCTTTTCGGGACTCAGACACATGCTCCAATTGGATTTCGATTGCCACCTTCTATATCACGCCTAACCTCTTTGACTAACTTAACTTTAAGCTTCTGCAATCTAACAGAAGAGTTAATGCCAGATGATTTTTGTCAGTTGTCTTCATTGATTAGTTTAGATCTCACTGGCAACAATTTTGTTAGCCCACCACGCTGCGTTTCTAAACTCTCAAAACTTATATTTCTGTACCTAAACCAGTGCGACAAGCTTCAGTGGTTGCCGGAGTTTCCATCAAACATTCGAGCAGTGGAGGCAAGCAATTGTGCTTCACTAGAAGTTTCCAAATTCAATCCATCCATGCCATGCAGTCTCTTTGCGTCACGTGTAGAAGGGCTCTTACGTAGTGAAAAGCTCATAGAACTGATGAGCCTTTTTCAGGCACATCTTCCCGAAGCTCGATTTGATATGGTTATCACAGGGAGTAAAATCCCATCATGGTTTGTCCCTCAAAAATGTGTTTCCTTTGCAAAAATATCAGTTCCTCATAATTGCTCTCCAAGTGAATGGGTGGGATTTGCTTTGTGTTTCTTGTTAGTAAGTTATGCTTACCCACCTGAGGAGTGTAGACATGAAATTGAACTCTACTTGTTTTCACCAACTGGTAAGAAGTTCATTACAACCAAGTTATTACCTCTCATGGAACCCGGTTACCCTCACCTTTATATTCTCTATTTGTCGATTGAAGAATACCGAAACAATATCAATGAAGTTGGTGAGAACAATGAGATTGAATTTGTATTAAAATGTTATTGCTGCCATTCATTGCAAATTGTGCGGTGTGGGTCCCGTTTGGTATGTAAGCAAGATGTTGAAGATATTTATGGAAACCATGTCTAG 3405 0.39 MALNINTPSSSSPPSILTTQWTNHVFLSFKGDDTRKGFTDHLFASLERKGIKTFKDDHGLQKGKVISLELIKAIEESMFALIILSPNYASSTWCLDEVQKIVECSKSFGQTFFPIFYGIEPSDVRHQKGTFAKYFNKHEKRFKNQRGKVEKWRNALTEVANHSGWDSKDQHEAALVEAIVDHMHKKVIPRLPYCADNLVGIDYRMEKVNSLIGMGLNDVRFIGIWGMGGIGKTSIARLVYEVIKEHFKVSCFIESIREVSETNGLVHIQRELLSQLNIRSGVFSNLYDGKKIIANSLCNKKVLLVLDDVSELKQLENLALKQEWFGPGSRVIITTRDKHLLHIHGVHKTCKVGGLTEKEALQLFCLKAFKQDQPEEKYRSLCEEVVEYARGLPLALEVLGSHLHGRTVEVWHSAIKQVRSAPHSKIQDTLKISYDGLELMEKNLFLDIACFFKGMGKEEVLEILEKCGHCSKIGIEILIERSLVTLDWKDKLGMHDLIQEMGRKIVVEESPDDPGRRSRLWSREDIDHVLTKNKGTDAIQGIVLNLVEPHQAYWNTEAFSKISRLRLLKLCQMQLPLGLNCLPCELKVLHWKGCPLKTLPVTNQLDEVVDLKLPYSEIVQLWHGTKFLEKLKSIDLSFSMNLKRSPNFSGVPNLESLDLEGCKSLTEVHPTVAFLKKIVLLNLKDCKRLKSLPSKLDMSSLKNINLSGCSEFKVVPEFGESMQHLSMLSLEETAITKLPSSLGNLVGLTYLELQNCKNLVCLPDTIHKLKSLIVLNVSGCSKLGSLPEGLKEIECLEELCASGTAIEELPSSVFHLENLREMSFSECKGPVSKSANMFSPFKWLFGTQTHAPIGFRLPPSISRLTSLTNLTLSFCNLTEELMPDDFCQLSSLISLDLTGNNFVSPPRCVSKLSKLIFLYLNQCDKLQWLPEFPSNIRAVEASNCASLEVSKFNPSMPCSLFASRVEGLLRSEKLIELMSLFQAHLPEARFDMVITGSKIPSWFVPQKCVSFAKISVPHNCSPSEWVGFALCFLLVSYAYPPEECRHEIELYLFSPTGKKFITTKLLPLMEPGYPHLYILYLSIEEYRNNINEVGENNEIEFVLKCYCCHSLQIVRCGSRLVCKQDVEDIYGNHV 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0862 1134 Gene3D Ribonuclease Inhibitor 558 714 IPR032675 -
Lal22g0862 1134 Gene3D - 17 185 IPR035897 -
Lal22g0862 1134 PRINTS Disease resistance protein signature 221 236 - -
Lal22g0862 1134 PRINTS Disease resistance protein signature 296 310 - -
Lal22g0862 1134 PRINTS Disease resistance protein signature 389 403 - -
Lal22g0862 1134 PRINTS Disease resistance protein signature 649 665 - -
Lal22g0862 1134 SUPERFAMILY L domain-like 494 939 - -
Lal22g0862 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 448 IPR027417 -
Lal22g0862 1134 Pfam NB-ARC domain 206 433 IPR002182 GO:0043531
Lal22g0862 1134 Pfam TIR domain 24 189 IPR000157 GO:0007165
Lal22g0862 1134 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 165 IPR035897 -
Lal22g0862 1134 Gene3D - 354 444 IPR042197 -
Lal22g0862 1134 Pfam C-JID domain 995 1127 IPR045344 -
Lal22g0862 1134 Gene3D - 186 350 IPR027417 -
Lal22g0862 1134 PANTHER - 21 948 - -
Lal22g0862 1134 Gene3D Ribonuclease Inhibitor 715 951 IPR032675 -
Lal22g0862 1134 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 948 IPR044974 GO:0006952
Lal22g0862 1134 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Lal22g0862 1134 SMART till_3 22 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0862 Lal-Chr22 6579251 6588603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0862 14 839 WRKY Transcription Factor Family AT4G12020 32.349 1.71e-117 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0862 - - gmx:100815486 1583.16