Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0855 ATGAAGAGCCCTGCCCCAACTACAAGCCGCGGGAACGGAAGCTCCGGCCACCGTAGCACGCCGGAAAGCCTCGATTGTTCTCCGACTTCCGGTTACACCTCTTCTACGGCCACCCGCCGGAATCCTGTGGCTGCTATCGTCGGAATTTTCACAGCGTGCTTTTCGCCACCAGATACCAACAATTCCAAGAGCTTTATGGATTCTGAAGAGTTCAAATCTTCATCTGTTGCTTCAGAAGCTTCAAGGTCTGAGAGTAGTAAAGTGAGTGGCTCAAGTCGAGGTATCAACATCAGTTTACATAACTCAATCCAGGGTGAGCCTGGCATTGTGAAGTTCACCATGGAGGAAATTTTCCAAGTCACAAGAAACTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGTACAGTATACAAGGCCAAACTCCTCAATGGAACTGTAGTTGCGGTGAAGCGTGCGAAGAAGAGTGTAAACGAGAAGCATTTGGGTGTTGAGTTCCAGAGGGAGGTTCAAACCCTGTCACGGGTAGAACATTTGAACCTGGTCAAGTTCTATGGGTATTTGGAGCAAGGAGAAGAAAGAATTGTTGTTATGGAGTATGTTCCAAATGGAACACTTAGAGAACATTTAGATTGTGAGTTTCCCGTTGTTTTAGCTATACTATGCTTCTGTGGCATTCATGGAAGCATTCTGGACCTAGCTTCTCGTCTAGACATTGCAACTGATGTGGCTCATGCCATCACCTATCTTCATATGTATATAGATCGTCCAATTATTCATAGAGACATAAAATCTTCCAACATTCTCCTAACCGAAAATCTTAGAGCTAAGGTAACAGACTTTGGTTTTTCTAGACAAGCAGCTGACATTGACTCTGGCATGACCCATGTATCCACCCAAGTTAAAGGAACAGCTGGCTACTTGGATCCTGAATACTTGAGAACTTATCAACTAACCGAAAAGAGTGATGTGTACTCATTTGGTGTTTTGCTTGTTGAACTGGTCACAGCAAGACGTCCCATTGAACCAAAATTTGAACTCAAGGAGCGAATAACAGCAAAATGGGCTATGCAGAGGCTTGTTGAGGGAGAGGCCATCTCCGCCTTGGACCCAAAACTAGATCGAACTGCAGCAAATTCTCTGGCCTTGGAAAAGATATTTGAACTTGCTTTACAATGTTTGGCGCCTCAAAGACAAAACAGGCCTAATATGAAGAAATGTGCTGAGATCCTTTGGACCATCCGTAAGCATTACAGAGAGCTATCGGCTTCCGAGTTTCGCTCACTTTCTTCCATTTCACAACGAAGCGCTTCAACTAAAGAGTAA 1329 0.447 MKSPAPTTSRGNGSSGHRSTPESLDCSPTSGYTSSTATRRNPVAAIVGIFTACFSPPDTNNSKSFMDSEEFKSSSVASEASRSESSKVSGSSRGINISLHNSIQGEPGIVKFTMEEIFQVTRNFSPSFKIGQGGFGTVYKAKLLNGTVVAVKRAKKSVNEKHLGVEFQREVQTLSRVEHLNLVKFYGYLEQGEERIVVMEYVPNGTLREHLDCEFPVVLAILCFCGIHGSILDLASRLDIATDVAHAITYLHMYIDRPIIHRDIKSSNILLTENLRAKVTDFGFSRQAADIDSGMTHVSTQVKGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVTARRPIEPKFELKERITAKWAMQRLVEGEAISALDPKLDRTAANSLALEKIFELALQCLAPQRQNRPNMKKCAEILWTIRKHYRELSASEFRSLSSISQRSASTKE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0855 442 SUPERFAMILY Protein kinase-like (PK-like) 102 416 IPR011009 -
Lal22g0855 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lal22g0855 442 ProSitePatterns Protein kinases ATP-binding region signature. 130 156 IPR017441 GO:0005524
Lal22g0855 442 Gene3D Transferase(Phosphotransferase) domain 1 202 437 - -
Lal22g0855 442 SMART serkin_6 124 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0855 442 PANTHER RECEPTOR-LIKE PROTEIN 55 16 431 - -
Lal22g0855 442 MobiDBLite consensus disorder prediction 1 38 - -
Lal22g0855 442 Gene3D Phosphorylase Kinase; domain 1 84 201 - -
Lal22g0855 442 MobiDBLite consensus disorder prediction 72 94 - -
Lal22g0855 442 ProSiteProfiles Protein kinase domain profile. 124 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0855 442 Pfam Protein tyrosine and serine/threonine kinase 129 412 IPR001245 GO:0004672|GO:0006468
Lal22g0855 442 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 16 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0855 Lal-Chr22 6520925 6524243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0855 112 410 Receptor kinase-like Gene Family AT1G79620 44.737 3.01e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lal22g0855 PK_Tyr_Ser-Thr 3.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0855 - - gmx:100305435 583.948