Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0840 ATGACAAAGCAGTCCCAAAGACGCACTCTGCGGTATGAGAAAGATAAGTTGGGCTGTATGCGGGGTTTAATTAATATGTTTGATTTTCGCCACGGTCACACTTCTCAGAAGTTGATTGCGGAAAGGAGGGGAAGCAGCAAACAAGCTGTTGGTTCTATTCATTCTAAGAACAAGTTTGAGGGGTTGAGCAATTTCGATGAAGTTACAGAAGGCGATCTTGACAATGTAGAGAGTAAACGAGTGACGGTAAAAACTTATGCTAATAAGCCTAGTGTGAAGAAACTCATTGAAGAAGAGATGTTCGTTGACCGGAATCAAGTGAAGGATATAGATAATGCTAAATTAGAATCAAAGAAAGCTTCCAAGGAAAGTCGTGATACGGACACTGATGATTTAGATTTGGATGCAACTTTGAAATCCGAAAGTTCACATAATCAGCACTCAAGGCAGCAATCTAAAGATGATATTGATCTGGATAAGGTAATTGCAGAGTTTTTTCATTTAAAAGATGTTAGTTCCATGATGCATGGCAATGATGGAGAAGTTGACGTGCAGTCAAAACAGAAGCATGCTATTTCTGAAAATATTGCAAGAGATGCTATTGATGAATTTGTGAATCAGATGATATTGAATAGCAAAAATCTTGCAGAAGCTAGAAAATTCCTTTGCTCCGATGAACTTAGGGAAGCACTTAAGCTTATAAGTTCAGAGAAGGAATTTTCCCTTCCAGTTGAACAAGATCCAAATTCACTTGTATTGAAATATGTGCAAGACTTTGTGAATTCTCGGAGGAAAACAAACAAAGATTGTAGTTCAGTTAATGGTTCCAACTTCTCTAAACAAGAACTTGGAAATCTGGAACAGACTAAGGAGATTGTGAACCACAAGAAGTATAACTTTTTCAGAAGAAAGGTGAAGTCTCAATCAAAAAGTTCAACAAATGAGAATGGAAATACTGACTTTTCAAATAGGATTGTTATTTTGAAGCCCGGGTCAATGGACTTGAAAAATTCTGCAACAGAAAACAACATTGCCTCGCCCTTACATTCTCACAGTGAAGTCGGTGCCAATGGTCCTTATGCTATAGGCAGTTCATATTTTTTTCTTACAGAGATAAAGAAGAAATTAAAGCATGCTATGGGAAGGAATAAACATGGAAACTCTAAAGATATCTCTAGAAAATACCCTGCTGAATCTCAAAATAAGGGGCCGAGTGGCAAAGCAGTTGGTAAAGACAATGTCGTAATGCGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATTTCAAGACCTACAAATGATGTTATGAAAGGAGAGAAGACTGGTACATTGAAAGATTCCGAGTTGACTACGGAACATGAAAATGGTAGTTATCCCAAACCAAAACTTTCTAACTTATACATAGAGGCTAAGAAACATCTATCTGAGATTGTAAGTAATGGAGATGAGAACATTGAGTTGTCAAGTAGGAAGTATCCCAGCACCCTCGGGAGAATATTATCTCTTCCCGAGTACAACTTTTCTCCCCTCGGTAGTCCTGTAAGGGATTTGGAGCACAATTTTGTGACTGCACGGACAAGATATTCTGCTCGAAATAAAAACTCGGAGGATAATGAGAATAATTTGTCTCCCAAACAAGCAACCTGTATCAATCATTTAGATCGGGAAACAGACAATCCAGAGAAGCAGTCATGCATTTGTGGTAAAAGTTCTAATGATAAAGTACAAGAAATGGAGTCAGACTCAAATTTCTCACATGATCATAATCAAGTTATTAAAGAGGAAAATAGCTGTCTTGTTAGAGATGAGATAGTTACTGAAGGTGATTTAGAATCTGCAAAAGAGATAGATATTATTTTGGAATCTTTCTCAGAACCCATTGGCCTCGGTACAGGAAAGGAAAACAATAATATCTCAGAAATTCCTGATACTGCAAGTTGTTCTCAATGTATGAAGCAGGATGTAATAGAAGAAAACCAACCATCAGCTCCACTGGCATTGCCTTCTCACTCATCAATCACTAATAAAATTGAAGAGCTAGAAAGTGGTTCAGATATATGTGTGCGGCCGAGTCCTGCATCGGTTCTTGATATATTCTTAGAGGATGATGTCAGTCCTGGCTACTCCAGATTTCAGCCTGTCGAAGTACGAGTAAGGCCATTACCATTTGAAGGACAAGATTCTTCACCCGTGAATCGATTACATGGGAGAAAACACTGTCTTGAAGATAACGAATTGATATATGACTACATTAAAAAAGTCCTGCAAGCCTCTGGGTTGACTAGGGATCAGCTGATAATGAAATGCCTTTTCTCGGACAAGATACTAGAACCTTCCTTGTTTGATCAGGTAGAGCTCCTATCGAACCGACTTTGCCAGGATCAGAAGCTCCTATATGACTGCACCGATGAAGTTCTCATGGAGGTTTGTTGCCATTACTTTGGGGTCTCGCCTTTCATATCATTTGTAAATCCTAGCACAAGGCTAACTCCAACTATGCAAAAAGTTATCATCAAAGTTTTGGAAGGAGTGTGCTGGTATTTCCTTCCCTTTCCTCCACCGCGTACCCTGGACAAAATTGTTAGGAAAGACATGGAAAAAAACGGCTCGTGGATGGACCTCCGGTTCGAAGCCGAAAAAGTCGGTTTTGAAATGAGTGAAGCCATTCTTGCAGATCTAATGGAAGATGCAATATTAAGCTGTGTAAGTGAAAAAGCAGAAAGTAAATGTTGTGAACTTCAACTAGAATTGGAAGACAAGAAGATTATCACAAAATGA 2781 0.3851 MTKQSQRRTLRYEKDKLGCMRGLINMFDFRHGHTSQKLIAERRGSSKQAVGSIHSKNKFEGLSNFDEVTEGDLDNVESKRVTVKTYANKPSVKKLIEEEMFVDRNQVKDIDNAKLESKKASKESRDTDTDDLDLDATLKSESSHNQHSRQQSKDDIDLDKVIAEFFHLKDVSSMMHGNDGEVDVQSKQKHAISENIARDAIDEFVNQMILNSKNLAEARKFLCSDELREALKLISSEKEFSLPVEQDPNSLVLKYVQDFVNSRRKTNKDCSSVNGSNFSKQELGNLEQTKEIVNHKKYNFFRRKVKSQSKSSTNENGNTDFSNRIVILKPGSMDLKNSATENNIASPLHSHSEVGANGPYAIGSSYFFLTEIKKKLKHAMGRNKHGNSKDISRKYPAESQNKGPSGKAVGKDNVVMRSPNKDHFFIEKISRPTNDVMKGEKTGTLKDSELTTEHENGSYPKPKLSNLYIEAKKHLSEIVSNGDENIELSSRKYPSTLGRILSLPEYNFSPLGSPVRDLEHNFVTARTRYSARNKNSEDNENNLSPKQATCINHLDRETDNPEKQSCICGKSSNDKVQEMESDSNFSHDHNQVIKEENSCLVRDEIVTEGDLESAKEIDIILESFSEPIGLGTGKENNNISEIPDTASCSQCMKQDVIEENQPSAPLALPSHSSITNKIEELESGSDICVRPSPASVLDIFLEDDVSPGYSRFQPVEVRVRPLPFEGQDSSPVNRLHGRKHCLEDNELIYDYIKKVLQASGLTRDQLIMKCLFSDKILEPSLFDQVELLSNRLCQDQKLLYDCTDEVLMEVCCHYFGVSPFISFVNPSTRLTPTMQKVIIKVLEGVCWYFLPFPPPRTLDKIVRKDMEKNGSWMDLRFEAEKVGFEMSEAILADLMEDAILSCVSEKAESKCCELQLELEDKKIITK 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0840 926 MobiDBLite consensus disorder prediction 435 459 - -
Lal22g0840 926 Pfam Domain of unknown function (DUF4378) 750 897 IPR025486 -
Lal22g0840 926 MobiDBLite consensus disorder prediction 379 413 - -
Lal22g0840 926 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 915 - -
Lal22g0840 926 Pfam Protein of unknown function (DUF3741) 206 250 IPR022212 -
Lal22g0840 926 MobiDBLite consensus disorder prediction 435 456 - -
Lal22g0840 926 PANTHER (, RELATED) 1 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0840 Lal-Chr22 6302088 6307917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0840 1 887 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.385 2.71e-100 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0840 - - gmx:102667950 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0840 22 6302088 6307917 Lal22g0840 22 6302088 6307917 ECH
Lal22g0840 22 6302088 6307917 Lal18g0729 18 8399172 8404918 LSH