Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0825 ATGGGGGTTCAGTGCTCCACTCTTATCCCATGTTGTGTGAATTCTCAAGTTAAGGCTTCTGTTGTTGAAATTCCAGATGCTGAAAATGAGGATAGAAGTGAGGTCATTAACTCGCCTATATTCCGAGAATTTACACTCGAGCAACTTAAGAATGCAACATCTGGTTTTGCGCTTGAGAATATTGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTTTTTAAAGGGAAGCTGGAGAGTCAAATGAGGATTGCTGTTAAGCGGTTTAATAGAAATGCTTGGCCCGACTCTAGGCAGTTTTTGGACGAAGCAAGATCAGTTGGTCAGCTTCGTAACCAAAGATTGGCAAATTTGCTTGGTTGTTGTTGTGAAGGAGATGAGAGGTTGCTTGTGGCAGAGTACATGCCCAATGAAACACTTGCAAAACACCTTTTCCATTGGGAAGCACAACCTATGAAGTGGGCAATGCGACTAAGAGTTGTTCTACATCTTGCACAAGCCCTAGAGTACTGCACAAGCAAAGGGCGTGCCCTTTATCATGACCTTAATGCATATAGAATTTTATTTGATGAGGATGGTAATCCTAGGCTTTCAAGTTTTGGCCTTATGAAAAATAGCAGAGATGGGAAAAGTTATAGCACAAATTTGGCATTTACCCCTCCAGAATATCTCAGAACCGGGCGAGTCACACCAGAAAGTGTAATATATAGCTTTGGTACTCTTTTGCTTGACCTTCTCAGTGGGAAGCATATTCCTCCAAGTCATGCCCTTGATTTGATCCGGGATAGAAATCTTCAGATGCTGACAGATTCTTGTTTGGAGGGACAATTTTCTGATGACGATGGAACTGAGTTGGTACGCTTGGCATCTCGATGTTTACAGTATGAACCTAGAGAACGGCCTAATCCAAAGTCATTGGTGGCTGCTTTGGCTCCTCTTCAGAAGGAAACCGAGGTTCCTTCACATGTCTTGATGGGTATCCCAAATAGTGCTTCCTTTGCTTCGTTATCTCCACTCGGTGAAGCATGCTCAAGAAAGGACTTGACTGCCATACATGAAGTTCTGGAAAATCTTGGCTATAAAGATGATGAAGGAGTGACAAATGAGCTATCATTTCAGATGTGGACTGATCAAATGCAGGACACATTAAATTGTAAGAAAAGGGGTGATGTTGCTTTTCAGAAGAAAGATTTTAGATCGGCGATCGAGTGCTACACACAGTTCATCGATGCTGGAACAATGGTTTCTCCAACAGTCTATGCGCGGCGCAGTTTGTGTCATCTCATTAGTGACATGCCTCAGGAAGCACTAAATGATGCAATGCAAGCACAAGTCATTTCCCCTGTATGGCACATTGCATCATATCTTCAATCTGTTGCTCTTGCTGGACTTGGGATGGAGAATGAAGCACAAGCAGCACTGAAAGATGGAACAACTCTGGAATCGAAGCGGAACGGAAACGGAACCTCTAAACAAAGGTGA 1482 0.4305 MGVQCSTLIPCCVNSQVKASVVEIPDAENEDRSEVINSPIFREFTLEQLKNATSGFALENIVSEHGEKAPNVVFKGKLESQMRIAVKRFNRNAWPDSRQFLDEARSVGQLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWEAQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHVLMGIPNSASFASLSPLGEACSRKDLTAIHEVLENLGYKDDEGVTNELSFQMWTDQMQDTLNCKKRGDVAFQKKDFRSAIECYTQFIDAGTMVSPTVYARRSLCHLISDMPQEALNDAMQAQVISPVWHIASYLQSVALAGLGMENEAQAALKDGTTLESKRNGNGTSKQR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0825 493 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Lal22g0825 493 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Lal22g0825 493 SUPERFAMILY Protein kinase-like (PK-like) 32 319 IPR011009 -
Lal22g0825 493 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Lal22g0825 493 Gene3D Tetratricopeptide repeat domain 380 491 IPR011990 GO:0005515
Lal22g0825 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 487 IPR045845 GO:0004672|GO:0009742
Lal22g0825 493 PANTHER LRR RECEPTOR-LIKE KINASE 1 487 - -
Lal22g0825 493 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0825 493 SUPERFAMILY TPR-like 381 480 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0825 Lal-Chr22 6175455 6181694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0825 10 313 Glycoside Hydrolase AT3G07070 33.434 7.36e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lal22g0825 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0825 K14500 - gmx:100781311 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0825 22 6175455 6181694 Lal22g0825 22 6175455 6181694 ECH
Lal6g0951 6 6631388 6637019 Lal22g0825 22 6175455 6181694 LSH