Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0815 ATGCCTCGTGGTACACTTGAAGTTGTTTTGGTCAGCGCCAAAGGCCTTGATGACAATGATTTTCTCTCTAGCATAGATCCATATGTGATTCTCACATTCAGGGCACAAGAGCACAAGAGCACTGTGAAAGAAGGAGGTGGATCTAACCCACAATGGAATGAGATCTTTCTTTTCACTGTTTCTGATAGTGCTTCTGAACTCACTCTAAAGATAATGGAAAAAGACAATTTTAACCAAGATGATTTTCTCGGTGAGGCAATAATTCCTATAGATGCAGTGGTTGCAGAAGGTAGCATTCCAGAGACTGCATACAATGTTGTGAAAAATGAAGAATATTGTGGAGAGATTAAGCTGGCTCTCACTTTTAATCCTGAGCCTGAGAGATATGATGATCAAGGCTACAATGCAGAAGAGAGCTATGGTGGATGGACAGAATCAAACAGAGATATCTAA 453 0.404 MPRGTLEVVLVSAKGLDDNDFLSSIDPYVILTFRAQEHKSTVKEGGGSNPQWNEIFLFTVSDSASELTLKIMEKDNFNQDDFLGEAIIPIDAVVAEGSIPETAYNVVKNEEYCGEIKLALTFNPEPERYDDQGYNAEESYGGWTESNRDI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0815 150 Pfam C2 domain 4 101 IPR000008 -
Lal22g0815 150 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lal22g0815 150 SMART C2_3c 5 102 IPR000008 -
Lal22g0815 150 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 149 - -
Lal22g0815 150 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 128 IPR035892 -
Lal22g0815 150 PANTHER C2 DOMAIN-CONTAINING 1 149 - -
Lal22g0815 150 Gene3D C2 domain 2 125 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0815 Lal-Chr22 6080351 6083919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0815 4 94 C2H2 Transcription Factor Family AT4G21160 35.165 3.78e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0815 - - gmx:100500006 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0930 6 6469309 6471393 Lal22g0815 22 6080351 6083919 LSH