Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0810 ATGAGTTTTGGAGGATTCTTAGACAAAAACTGTGGTGGTGGTGCAAGAAACTTATCAGATATTCAACATAGCAACCGTACCACCACCAATCAAAACAACAACAATAGAATAATGCCCTCTGGTGCAATCTCACACCATCGCCTTATGACTCCAACTTTGGCTAAACCCATGTTCAACTCTCCTGGGTTATCTCTAGCACTTCAAACTAATATTGATGGGCAAGGAGATCATTTGAATAGATCAATGGGTGAGAATAATAATTTTGAGGTGAATGGTTTGAGAAGGAGCAGAGAAGAAGAACATGAAAGTAGATCTGGTAGTGATAACATGGATGGTGCTTCTGGTGATGATGAACAAGATGCTGCCGACAACCCTCCAAGAAAAAAACGTTATCACCGACACACTCCACAGCAAATACAAGAACTTGAATCGTTGTTTAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGACTAGAACTAAGCAAAAGGCTATGCTTGGAAACAAGGCAAGTGAAGTTTTGGTTCCAAAATCGGAGAACCCAAATGAAGACACAATTGGAGCGCCATGAGAACTTGCTGCTAAGACAAGAGAATGATAAGCTTAGAGCTGAGAACATGTCAATTAGGGAAGCTATGAGGAATCCAATGTGTTCAAATTGTGGGGGACCAGCTATTATTGGTGACATTTCAGTAGAGGAACAACATCTTTGGATTGAGAATGCACGGTTGAAGGATGAGTTAGATCGAGTTTGCGCGCTTGCTGGCAAGTTCTTAGGCCGACCCCTTTCGTCAATGACAAACTCAATTGCTCCTCAATTGCCAAATTCAAGCTTAGAGCTTGGAGTTGGGAGCAATGGTAATGGATTTGGTGGAATGAGTAATGTATCTTCAACATTGCCTTTGGGGTCTTCTGATTTTGGAATAGGAGGTATGTCTAGCCCTTTAGCGATGGTGTCTCATTCCACTAGACCAACGGGTTCGGTGGTCACTGGTTTCGATAGATCGATGGAGAGGTCTATGTTTTTGGAGCTTGCTTTGTCTGCAATGGATGAGTTGATGAAAATGGCACAAACTAGTGAGCCTCTTTGGATAAAGAGTTTAGAAGGGGGAAGGGAAATTATGAACCATGAGGAATATTTGAGGACTTTCACACCTTGCATTGGCCTCAGATCCAATGGTTTTGTCTCTGAGGCTTCTAGAGAGACTGGAATGGTTATCATAAACAGTTTGGCCCTTGTTGAGACTCTAATGGACGCGAATCGATGGGCTGAGATGTTTTCTTCTATGATTGCCACAACCTCTACCACTGAAGTGATATCAAATGGAATAAATGGAACAAGAAATGGTGCACTTCAACTAATGCATGCCGAGCTTCAAGTACTTTCACCTTTAGTTCCAGTCCGGGAGGTGAATTTCCTCCGATTTTGTAAGCAACACGCCGAAGGAGTGTGGGCTGTGGTGGATGTGTCTATAGATACTATCAAAGAAATTTCTGGTGCACATAATTTTGTGTACTGTAGAAGGCTTCCTTCTGGTTGTGTGGTGCAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAACATGCAGAATATGATGAAAGCCAAGTTCACCAGCTATACAGACCCTTGTTGAGCTCCGGCATCGGCTTCGGCGCCCAACGGTGGGTCGCTACCCTCCAACGCCAATGTGAGTGCCTCGCCATCCTAATGTCCTCTGCAGCACCCTCTCGGGACCACTCAGCGATAACTGGAGGTGGAAGGAGAAGCATGCTGAAGCTAGCACAACGCATGACTAGAAACTTCTGTGGTGGGGTATGCGCTTCAACGATGCACAAATGGAACAAACTGAACCCAGGGAATGTAGAGGAGGATGTGAGGGTGATGACGCGGAAGAGTGTGGATGATCCAGGTGAACCACCTGGTGTTGTGTTGAGTGCAGCAACTTCTGTGTGGCTTCCAGTTTCACCAAAGCGAGTATTCGATTTCCTACGCGACGAGCGGCTTAGAAGCGAGTGGGATATACTCTCCAACGGTGGTCCCATGCAGGAGATGGCCCACATTGCTAAAGGCCAAGACCATGGCAACTGCGTCTCTCTCCTAAGAGCTAGCGCCATGAATTCGAACCAGAGTAGCATGCTGATACTCCAGGAGACATGCATAGACGCAGCTGGGTCGCTTGTAGTGTACGCGCCGGTAGATATCCCGGCCATGCATGTGGTCATGAACGGCGGTGACTCAGCTTACGTGGCGTTGCTTCCATCGGGGTTTGCAATTGTCCCTGATGGGCCCGGGTCACGTGGGACACAGAATGGTGGAGCCACCACAAACAGTGGCAACAATGATGATGAGGCGCGTGTAAGTGGGTCCCTTCTAACGGTGGCGTTTCAAATCCTTGTGAATAGCCTCCCTACAGCAAAACTCACCGTAGAGTCCGTGGAAACGGTAAACAACTTAATCTCATGCACCGTTCAGAAGATCAAAGCCGCGCTTCATTGA 2502 0.466 MSFGGFLDKNCGGGARNLSDIQHSNRTTTNQNNNNRIMPSGAISHHRLMTPTLAKPMFNSPGLSLALQTNIDGQGDHLNRSMGENNNFEVNGLRRSREEEHESRSGSDNMDGASGDDEQDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENLLLRQENDKLRAENMSIREAMRNPMCSNCGGPAIIGDISVEEQHLWIENARLKDELDRVCALAGKFLGRPLSSMTNSIAPQLPNSSLELGVGSNGNGFGGMSNVSSTLPLGSSDFGIGGMSSPLAMVSHSTRPTGSVVTGFDRSMERSMFLELALSAMDELMKMAQTSEPLWIKSLEGGREIMNHEEYLRTFTPCIGLRSNGFVSEASRETGMVIINSLALVETLMDANRWAEMFSSMIATTSTTEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIKEISGAHNFVYCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGIGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAITGGGRRSMLKLAQRMTRNFCGGVCASTMHKWNKLNPGNVEEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPKRVFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGTQNGGATTNSGNNDDEARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALH 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0810 833 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 79 832 - -
Lal22g0810 833 Gene3D - 114 200 - -
Lal22g0810 833 SMART START_1 343 567 IPR002913 GO:0008289
Lal22g0810 833 CDD homeodomain 127 185 IPR001356 GO:0003677
Lal22g0810 833 ProSitePatterns 'Homeobox' domain signature. 160 183 IPR017970 GO:0000981|GO:0006355
Lal22g0810 833 MobiDBLite consensus disorder prediction 764 785 - -
Lal22g0810 833 CDD START_ArGLABRA2_like 338 566 - -
Lal22g0810 833 ProSiteProfiles START domain profile. 334 570 IPR002913 GO:0008289
Lal22g0810 833 SUPERFAMILY Bet v1-like 335 567 - -
Lal22g0810 833 Coils Coil 179 214 - -
Lal22g0810 833 Pfam START domain 343 567 IPR002913 GO:0008289
Lal22g0810 833 SUPERFAMILY Bet v1-like 595 829 - -
Lal22g0810 833 SUPERFAMILY Homeodomain-like 113 185 IPR009057 -
Lal22g0810 833 SMART HOX_1 126 189 IPR001356 GO:0003677
Lal22g0810 833 MobiDBLite consensus disorder prediction 17 39 - -
Lal22g0810 833 MobiDBLite consensus disorder prediction 91 107 - -
Lal22g0810 833 MobiDBLite consensus disorder prediction 74 90 - -
Lal22g0810 833 ProSiteProfiles 'Homeobox' domain profile. 125 185 IPR001356 GO:0003677
Lal22g0810 833 MobiDBLite consensus disorder prediction 74 135 - -
Lal22g0810 833 MobiDBLite consensus disorder prediction 13 39 - -
Lal22g0810 833 MobiDBLite consensus disorder prediction 769 785 - -
Lal22g0810 833 Pfam Homeodomain 128 183 IPR001356 GO:0003677
Lal22g0810 833 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 79 832 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0810 Lal-Chr22 6018215 6024592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0810 1 833 Homeobox Transcription Factor Family AT3G61150 64.964 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal22g0810 START 8.4e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0810 K09338 - rcu:8258519 1323.53