Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0791 TCTCGCTTTTACACACTCTCATTTTGCTCTTGTTACACACTTTTTCTCCGCCGTCATCCCCGCCGTACAATCTATTCTCCGGCCACCTACATCTGCCGTAGCTTCTTCGCCGCCGACCACAAAATCGTCCAGCTTCTTTTAGATAGTTTAGCTTCAAAACTTGGAAATTCAGTAACTACTCTCAAAATGTCGCGGAAGGGTTTGATGGAACAAGACCTGAAAAAATTGGATGTGACAAAATTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAGGCTACCATTAATATTGGTACCATAGGTCATGTGGCACATGGCAAATCAACAGTTGTGAAAGCAATTTCTGGTGTTCAGACTGTGCGTTTTAAAAATGAGTTGGAGAGGAACATTACAATCAAGCTTGGCTATGCAAATGCAAAGATATACAAGTGTGAAGATGAACGGTGTCCAAGGCCCATGTCCTATAAGGCTTATGGGAGTGGAAAGGAAGACACTCCTCTGTGTGATGTGCCAGGGTTTGAAAACAGCAAAATGAAGTTGCTGAGGCATGTTTCTTTTGTGGATTGCCCGGGACATGATATTCTCATGGCTACAATGCTTAATGGAGCAGCAATCATGGATGGAGCTTTGCTACTCATTGCTGCTAATGAGAGCTGCCCACAACCACAAACATCTGAGCATTTAGCTGCTGTTGAAATTATGCGTCTACAGCACATCATAATCCTTCAGAACAAGGTAGACCTGATTCAAGAAAATGTTGCAATCAATCAGCATGAAGCAATTCAGAAGTTCATACAAGGAACTGTTGCTGATGGTGCACCAGTGGTACCTATTTCAGCACAATTGAAGTATAATATTGATGTTGTGTGTGAGTATATAGTGAAAAAGATTCCAATTCCTGAAAGGAACTTCATATCTCCCCCTAATATGATTGTCATTCGGTCATTTGATGTCAATAAACCTGGGTTTGAAGTTGATGACATAAAAGGAGGTGTAGCTGGTGGAAGCATTCTAAGGGGTGTTTTGAAGGTCAATCAATTCATTGAAGTTCGACCTGGTATAGTTGTTAAAGATGAGAATGGAAATATCAAATGCACACCCATATACTCTAGAATAGTTTCACTGTTTGCTGAACAAAATGAGCTTCAGTTTGCTGTGCCTGGAGGCCTCATTGGTGTTGGGACAACAATGGACCCCACTTTGACACGTGCTGATAGATTGGTAGGGCAAGTTCTTGGAGCAGTTGGATCATTGCCAGAAGTTTTTGTTGAACTTGAGGTGAATTTTTTCTTGCTTAGGCGGCTTCTAGGTGTCCGGACAAAAGGCACTGAGAGACAAGGAAAAGTATCTAAACTGGCTAAAGGAGAGATGCTAATGTTGAACATAGGATCAATGTCAACTGGGGCCAGAGTTGTTGCAGTGAAGAATGATTTGGCCAAGTTGCAACTTACTTCCCCTGTATGCACCAGCAAGGGTGAGAAGATCGCACTTAGTCGACGTGTCGAGAAGCATTGGCGTCTTATTGGGTGGGGTCAAATCCAAGCAGGAATCACCCTTGATGTTCCTAGTGCTCCCTTTTCAGCTGAAGACATAATAGAATAG 1602 0.427 SRFYTLSFCSCYTLFLRRHPRRTIYSPATYICRSFFAADHKIVQLLLDSLASKLGNSVTTLKMSRKGLMEQDLKKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDTPLCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFISPPNMIVIRSFDVNKPGFEVDDIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDENGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGAVGSLPEVFVELEVNFFLLRRLLGVRTKGTERQGKVSKLAKGEMLMLNIGSMSTGARVVAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPSAPFSAEDIIE 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0791 533 Pfam Initiation factor eIF2 gamma, C terminal 424 513 IPR015256 -
Lal22g0791 533 Pfam Elongation factor Tu domain 2 330 412 IPR004161 GO:0005525
Lal22g0791 533 Gene3D Translation factors 419 517 - -
Lal22g0791 533 CDD eIF2_gamma 95 302 IPR044128 GO:0005525
Lal22g0791 533 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 417 514 IPR009001 -
Lal22g0791 533 Gene3D Translation factors 305 418 - -
Lal22g0791 533 CDD eIF2_gamma_III 419 513 IPR015256 -
Lal22g0791 533 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 63 525 - -
Lal22g0791 533 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 63 525 - -
Lal22g0791 533 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 92 301 IPR000795 GO:0003924|GO:0005525
Lal22g0791 533 CDD eIF2_gamma_II 303 416 IPR044127 GO:0000049
Lal22g0791 533 PRINTS GTP-binding elongation factor signature 96 109 IPR000795 GO:0003924|GO:0005525
Lal22g0791 533 PRINTS GTP-binding elongation factor signature 185 195 IPR000795 GO:0003924|GO:0005525
Lal22g0791 533 PRINTS GTP-binding elongation factor signature 201 212 IPR000795 GO:0003924|GO:0005525
Lal22g0791 533 PRINTS GTP-binding elongation factor signature 239 248 IPR000795 GO:0003924|GO:0005525
Lal22g0791 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 304 IPR027417 -
Lal22g0791 533 Gene3D - 92 302 IPR027417 -
Lal22g0791 533 Pfam Elongation factor Tu GTP binding domain 94 298 IPR000795 GO:0003924|GO:0005525
Lal22g0791 533 SUPERFAMILY Translation proteins 302 416 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0791 Lal-Chr22 5805738 5810790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0791 63 526 Eukaryotic Initiation Factors Gene Family AT1G04170 90.753 0.0 879