Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0790 ATGGGTGCTGGTGATTACTATAAGATACTAAACGTGAACCATGATGCTAGTGATGAGGAACTGAAGAAGGCTTTTAAGAAGTTGGCAATGAAATGGCACCCTGATAAGAATTATCATCATCATAAGAAGGAAGAGTTTGAGGCCAACTTCAAGAAGATTTCTGAGGCTTATGATGTTCTTAGTGACCCAAAGAAGCGCCAGATCTATGATTTTTATGGTCACTATCCTCTTAATTCTCATAGGTATAATAAGGAAAATGGTGATGACAATGTTAAGGATCATGAGAAAAAAGGGGTGGTTGAGAGTAGTTTGGGTTGTACCCTTGAGGAGCTTTACAAAGGTTGCAGAAAGAGGATGAAAATCTCAAGGATTGTCCCTGATGAACTTCATAATTTAACATCTGTAGAGGAAATCTTGAAGATTGATATTAAACCGGGTTGGAAGAAGGGGACAAAAATCACTTTTCCTGGGAAAGGCAACCAAGAAAATGGATCCGCTCCCGCCGATCTAATCTTTGTGGTGGATGAAAAACCACATGCTCTTTTCAAGAGAGACAGAAATGATTTGGTAATGACTCAGAAGATATTGCTTGTTGATGCTCTCACCGGAGGAAAGACTCTCGACTTGACAACATTGGACGGGAGACACCTCACAGTCGAAGTGACTGAAATCGTGAAACCGGGCTACGAGCTAGTAGTCGCTAATGAAGGTATGCCTATTTCAAAAGAACCTGGAAAGAAAGGAAATCTTAGAATCAAGTTCGATGTTATGTTTCCATCGCGGTTGACCACACAACAGAAGTATGAACTAAAAAAGATTCTGGAGTGA 828 0.4034 MGAGDYYKILNVNHDASDEELKKAFKKLAMKWHPDKNYHHHKKEEFEANFKKISEAYDVLSDPKKRQIYDFYGHYPLNSHRYNKENGDDNVKDHEKKGVVESSLGCTLEELYKGCRKRMKISRIVPDELHNLTSVEEILKIDIKPGWKKGTKITFPGKGNQENGSAPADLIFVVDEKPHALFKRDRNDLVMTQKILLVDALTGGKTLDLTTLDGRHLTVEVTEIVKPGYELVVANEGMPISKEPGKKGNLRIKFDVMFPSRLTTQQKYELKKILE 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0790 275 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 274 - -
Lal22g0790 275 ProSiteProfiles dnaJ domain profile. 5 73 IPR001623 -
Lal22g0790 275 CDD DnaJ_C 100 262 - -
Lal22g0790 275 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Lal22g0790 275 Gene3D - 98 177 - -
Lal22g0790 275 Pfam DnaJ domain 5 70 IPR001623 -
Lal22g0790 275 SMART dnaj_3 4 65 IPR001623 -
Lal22g0790 275 PRINTS DnaJ domain signature 7 25 IPR001623 -
Lal22g0790 275 PRINTS DnaJ domain signature 25 40 IPR001623 -
Lal22g0790 275 PRINTS DnaJ domain signature 45 65 IPR001623 -
Lal22g0790 275 PRINTS DnaJ domain signature 65 84 IPR001623 -
Lal22g0790 275 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 274 - -
Lal22g0790 275 SUPERFAMILY Chaperone J-domain 4 80 IPR036869 -
Lal22g0790 275 CDD DnaJ 5 62 IPR001623 -
Lal22g0790 275 Gene3D DnaJ domain 1 95 IPR036869 -
Lal22g0790 275 SUPERFAMILY HSP40/DnaJ peptide-binding domain 182 267 IPR008971 GO:0006457|GO:0051082
Lal22g0790 275 SUPERFAMILY HSP40/DnaJ peptide-binding domain 102 179 IPR008971 GO:0006457|GO:0051082
Lal22g0790 275 Pfam DnaJ C terminal domain 101 259 IPR002939 -
Lal22g0790 275 Gene3D - 179 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0790 Lal-Chr22 5798185 5801597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0790 6 70 C2H2 Transcription Factor Family AT1G74250 37.313 4.47e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0790 22 5798185 5801597 Lal22g0790 22 5798185 5801597 ECH