Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0780 ATGGGGTTGGGTGGTGGTAAGAATGGATTTAATGGTAGTAAGGTAGTGGAGTCTTGGGATGTGAGTAAATCAAAGGGGATGAAGAAGAATAAGAAGAAGAAGAAGAAAGAGAGTGAGGTAGAGATAGTGGTGAAGGAAAAGGAAGATACTAGGTGTTGGGTTAGGCTAAGGTTATTTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATAGTTCAACCAGTGGCACCAGTAATCATTATGCTGAAAGTAAATCAACTAATGATACAAGCAGAGGCCAACCAGTAGTTCCTGTAGTGTCTTCTACATCCACTAGTAATACAGAAAGCAATTCATCGAGTTCAAAATTTGAGGAGGAGCTGAAAGTTGCTTCCAGGCTGCGAAAGTTCGCTTTCAATGATCTTAAGTTGGCAACGAGAAATTTCCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGGTGGATAGAAGAAAATGGAACTGCTCCAGTGAAACCTGGAACTGGGCTAACCGTTGCTGTAAAAACCCTCAATCATGATGGGCTCCAGGGTCATAAAGAGTGGCTGGCTGAAGTAAATTTTCTAGGTGATCTTGTTCATCCAAACCTTGTTAAGCTTGTAGGATACTGCATTGAAGATGATCAAAGGTTGTTAGTGTATGAGTTCATGCCTCGAGGAAGCCTTGAAAATCACTTGTTTAGGATAAAACTTATATCATATGCAGGATCCTTGCCTCTTCCGTGGCCCATTAGGATGAAAATTGCACTTGGAGCTGCTAAGGGTCTTGCTTTCCTGCATGAAGAAGCTGAACGGCTAGTAATATATAGAGATTTTAAAACTTCGAATATACTATTAGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGCCTTGCTAAAGACGGTCCAGAAGGTGATAACACCCACGTGTCGACTCGAGTGATGGGAACCTATGGATACGCAGCACCAGAATATGTCATGACAGGACATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTGGTACTGCTTGAGATGTTGACAGGCAGAAGATCTATGGACAAAAACCGACCCAATGGTGAACATAACCTTGTGGAATGGGCTCGACCACATCTAGGAGAGAGGAGAAGGTTCTACAGATTGATGGACCCTCGCTTGGAAGGTCACTTTTCAGTAAAAGGAGCTCAGAAAGCTGCACAATTGGCTGCTCACTGCCTTTGTAGAGATCCAAAAGCCAGACCATTGATGAGTGAAGTTGTGGAAGCTTTAAAGCCTCTGCCAAACCTTAAGGACATGGCAAGCTCTTCATATTATTTCCAGACGATGCAAGCAGACCGCTTCCGAGCTAGCCCGAATACTAGAAACAGGCAGACACAAGGAGGAGCATTGCTTACCCGGAATGGGCAGCAGAAAAAGAGCCTTTCAATACCAAATGGTACTCATGCTTCTCCATATCATCATCAATATGTCCAACAATCACCAAAACCCGATGTCAAAGCATAG 1518 0.4354 MGLGGGKNGFNGSKVVESWDVSKSKGMKKNKKKKKKESEVEIVVKEKEDTRCWVRLRLFGSCISSRSKVDSSTSGTSNHYAESKSTNDTSRGQPVVPVVSSTSTSNTESNSSSSKFEEELKVASRLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRIKLISYAGSLPLPWPIRMKIALGAAKGLAFLHEEAERLVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDNTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLMDPRLEGHFSVKGAQKAAQLAAHCLCRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFRASPNTRNRQTQGGALLTRNGQQKKSLSIPNGTHASPYHHQYVQQSPKPDVKA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0780 505 CDD STKc_IRAK 147 431 - -
Lal22g0780 505 MobiDBLite consensus disorder prediction 66 114 - -
Lal22g0780 505 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 71 495 - -
Lal22g0780 505 SUPERFAMILY Protein kinase-like (PK-like) 119 428 IPR011009 -
Lal22g0780 505 ProSiteProfiles Protein kinase domain profile. 141 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0780 505 Gene3D Transferase(Phosphotransferase) domain 1 227 450 - -
Lal22g0780 505 MobiDBLite consensus disorder prediction 66 113 - -
Lal22g0780 505 Coils Coil 28 48 - -
Lal22g0780 505 Gene3D Phosphorylase Kinase; domain 1 100 226 - -
Lal22g0780 505 MobiDBLite consensus disorder prediction 452 505 - -
Lal22g0780 505 PANTHER OS01G0588500 PROTEIN-RELATED 71 495 - -
Lal22g0780 505 Pfam Protein kinase domain 144 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0780 505 MobiDBLite consensus disorder prediction 452 495 - -
Lal22g0780 505 MobiDBLite consensus disorder prediction 1 39 - -
Lal22g0780 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Lal22g0780 505 ProSitePatterns Protein kinases ATP-binding region signature. 147 179 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0780 Lal-Chr22 5658174 5661892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0780 110 428 Glycoside Hydrolase AT3G07070 54.829 9.83e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal22g0780 Pkinase 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0780 - - gmx:100807510 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0780 22 5658174 5661892 Lal22g0780 22 5658174 5661892 ECH