Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0777 ATGTTGCAGCCACATTCTTGTTCTGCTACAACACAATCTTCCATTACCATTCCAATTCACACTTTCACTTCAAAGTTCATTCCTTTAAGCCGTGTTTCTTCTATACCCACTTTCTCTTTTACCCTCCAACCATTCTCTATCAGATGCCGCCACTCTCACTTCTATGAACCTAAACCATTTCCCTCTTCTCCACAAGCTCAACGCTATTCACCACCACCACCACCACCACCAGCTTCAGTTGGAGCTTTACCACCTAGGGTTTTTGTGGGGCACTCAATTTACAAAGGGAAGGCTGCACTCACTGTCTCTCCTAAATCTCCTGAATTTCAATCATTGGAATCCGGGGCATTCAAAATATCTAAGGAAGGTTCTGTGCTACTTCAGTTTGCTCCTGCAGTTGGTTCGCGCCAATATGATTGGAACAGAAAACAGGTGTTCTCGCTATCAGTGAGTGAATTGGGAACTATAATTAGCCTTGGTGCAAGGGAGTCTTTTGAATTTTTTCATGATCCTAATCAGGGAAGAAGTGATGAAGGTAAAGTTAGAAAAGTTTTGAAGGTGGAACCACTCATGGATGGTTCTGGCCACTTATTTAACCTCAGTGTTCAAAACAAGCTTGACAACATAGATGAAAACATCTTCATTCCTATTACAAAGGCAGAGTTGGCAGTTCTCAACTCACTTTTCAACTTTATCATGCCATACCTTCTAGGTTGGCATGCATTTGGAAACTCTATAAAGCCAGATAATTCAAGCAAAGTGAATAATGCCAATCCAATATATGGAGGAGACTATGAATGGAACAGATAG 810 0.4136 MLQPHSCSATTQSSITIPIHTFTSKFIPLSRVSSIPTFSFTLQPFSIRCRHSHFYEPKPFPSSPQAQRYSPPPPPPPASVGALPPRVFVGHSIYKGKAALTVSPKSPEFQSLESGAFKISKEGSVLLQFAPAVGSRQYDWNRKQVFSLSVSELGTIISLGARESFEFFHDPNQGRSDEGKVRKVLKVEPLMDGSGHLFNLSVQNKLDNIDENIFIPITKAELAVLNSLFNFIMPYLLGWHAFGNSIKPDNSSKVNNANPIYGGDYEWNR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0777 269 MobiDBLite consensus disorder prediction 60 81 - -
Lal22g0777 269 Pfam Whirly transcription factor 93 227 IPR013742 GO:0003697|GO:0006355|GO:0006952
Lal22g0777 269 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 17 269 - -
Lal22g0777 269 MobiDBLite consensus disorder prediction 64 81 - -
Lal22g0777 269 SUPERFAMILY ssDNA-binding transcriptional regulator domain 85 269 IPR009044 GO:0003677|GO:0006355
Lal22g0777 269 Gene3D Transcriptional Coactivator Pc4; Chain A 78 251 IPR009044 GO:0003677|GO:0006355
Lal22g0777 269 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 17 269 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0777 Lal-Chr22 5629594 5632730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0777 41 269 Whirly Transcription Factor Family AT1G14410 65.502 1.18e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Lal22g0777 Whirly 1.8e-58 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0777 - - lang:109355868 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0777 22 5629594 5632730 Lal22g0777 22 5629594 5632730 ECH