Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0774 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGATCAAGAACCTACTCTTGGGGAAGAAATCATCTTCGAATTCTAAATCATCAAAGAAGGGTGATATGTTTAAACCTTCAAATAACAAGGATGTGCTGCGGTGTTCTGAGTTAACCGTGTCTAATCCAATTGTGGGTTCTTTGGTGATATCCTCACCGATTTCTGGAGCTAATGCTATTAAAGGAGTGGTTTCAGAAAAGGAAGTAATTACTAGGTCATCGCATGACAAGGATATAATTTCAGCTGGGGATGAAGAGACTCATGCACAAGCTGTTGCTAATTTTCGATCTCACGAGGATCTTGAGAATCCCAGGCTTATAGAATCATCTATAACAGTTCAGGCTGCTTGCAGGGGCTATCAGGCTCGTCGAACATTTCAAAAACACAAAAGTGTCATACAAATACAAGCTCTTATTCGTGGTCACCTGGTTAGAAGACAAGCTGTTTCTGCTTTGAACTACGTGAAGGGAATAGTTAAACTTCAAGCATTGGCTCGTGGTTACAATGTTAGGTGTTCTGATATTGGGATTGCAGTCCTGAAAATTCGTAAGGATACTAAATGTTCAAATTCTGCTGGAGTAGTCAAAACAGCACATGCAGATAAGCTGTCTGATAGTGTCTTTGTTCGCAAGCTTTTAGCTTCATCGTCCCCAGCATTTCCTAGATGTCTCCGATTTAGTCCTGCAGAACCTAACATTTCTAAGGAGTGGCTTTACCGCTGGACAAGGTCACGCTTTTGGGCACCTCTTCCACAATTGAAGAAGAAACTTGATTCTGTGTCTGATGAAAATAATGGCAGTTGTCGAGTTGAAAGGGGACAAGTTAAAAGAAATACCCGGAAATCTCCTACTATAAAAGCTGAAGATGGATCAGGTTCTGGTTCTAACAAATATAAACAGCGACCCAAGAGGGATTCAAACGGCCCATTGCTTTCAGCTCAGGAACATCCACAAAAGGAAATCGAGAAAAGTAGTTCTGTTAAAACTCGAGTGCAGACTGTTTCACATATATCCGAGGTTAATGAGAAAGGAAAACACAGCACTAGAAAAATTTCAGATCGTACTGTCACTGATGTTCCAAAGCAGGGTTCAAGTGTCTCTTCAGAGAACATGAAAGATTTGGCAGTGACAAAATCAAAAGATTTGGCAGTGTCAAGTGCCTCTTCAGAGAAAATGAAAGATTTGACTGCGTCAAAATCAAGAGAGTCTAAAAGTGTTGGACAGCAAGTGGAAGACAACCATGATAATGTGCCACACAATGATCCTATTTCTGTCTTGCAGACTAGTGTAATGAATGGTACAGATGAAGGAACAAGAAAAATTTCAGATCACGCTGTCACTGAAGTTTCAAAGCAGGACCAAAGTGCCTCTTCAGAGAAAATGGAAGATTTGGCAGTGTCAAAGTCAAAGGAGTCTGATCCTGATAAAAGTGTCGGACAACAAGTGGAAGACAAGCATGATAATGACTTACATAATGATCCTATTGTTGTCTTGCAGACTTCCATAGTGAATGGTAGAGATGACGGAATTCAAGGAGTCGGCGAGGACTTGAATGGTGGGGACAATTGTATTAGAAACAATTACCAAAGAAGAGCTTCACTCCCGGGTAATTTTAACGATCAAGATAACGAGTCACATAACACTCCAAGACTACCCAGCTATATGGCTCCTACTGAATCTGTGAAAGCTAAGCTAAGAGCACAAGGCTCTCCAAGGTTTGCTTCTGATTTAGCAGACAAAAACAGTATCACTAGGCGGCATTCGCTTTCAGCTTCACTTAATGGCAAGTCTGATTCATTTTCCCCAAGAGCTGAAAGAATGATTATGAGTGGCAGAGGAGTGATAAAGACTGATAAATCTCTCTCATCTTCAAGGGATGGAAATGGGATTGGTAAGCATTTAACATTTTGCGCCTTTTCATCGCACTTTCTCATTTATTGA 1968 0.409 MGKGRSPGKWIKNLLLGKKSSSNSKSSKKGDMFKPSNNKDVLRCSELTVSNPIVGSLVISSPISGANAIKGVVSEKEVITRSSHDKDIISAGDEETHAQAVANFRSHEDLENPRLIESSITVQAACRGYQARRTFQKHKSVIQIQALIRGHLVRRQAVSALNYVKGIVKLQALARGYNVRCSDIGIAVLKIRKDTKCSNSAGVVKTAHADKLSDSVFVRKLLASSSPAFPRCLRFSPAEPNISKEWLYRWTRSRFWAPLPQLKKKLDSVSDENNGSCRVERGQVKRNTRKSPTIKAEDGSGSGSNKYKQRPKRDSNGPLLSAQEHPQKEIEKSSSVKTRVQTVSHISEVNEKGKHSTRKISDRTVTDVPKQGSSVSSENMKDLAVTKSKDLAVSSASSEKMKDLTASKSRESKSVGQQVEDNHDNVPHNDPISVLQTSVMNGTDEGTRKISDHAVTEVSKQDQSASSEKMEDLAVSKSKESDPDKSVGQQVEDKHDNDLHNDPIVVLQTSIVNGRDDGIQGVGEDLNGGDNCIRNNYQRRASLPGNFNDQDNESHNTPRLPSYMAPTESVKAKLRAQGSPRFASDLADKNSITRRHSLSASLNGKSDSFSPRAERMIMSGRGVIKTDKSLSSSRDGNGIGKHLTFCAFSSHFLIY 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0774 655 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 395 - -
Lal22g0774 655 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 433 637 - -
Lal22g0774 655 MobiDBLite consensus disorder prediction 403 427 - -
Lal22g0774 655 MobiDBLite consensus disorder prediction 366 382 - -
Lal22g0774 655 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Lal22g0774 655 Pfam IQ calmodulin-binding motif 138 156 IPR000048 GO:0005515
Lal22g0774 655 Pfam IQ calmodulin-binding motif 165 181 IPR000048 GO:0005515
Lal22g0774 655 MobiDBLite consensus disorder prediction 1 37 - -
Lal22g0774 655 MobiDBLite consensus disorder prediction 464 499 - -
Lal22g0774 655 MobiDBLite consensus disorder prediction 348 365 - -
Lal22g0774 655 MobiDBLite consensus disorder prediction 429 445 - -
Lal22g0774 655 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Lal22g0774 655 PANTHER IQ-DOMAIN 5-RELATED 433 637 - -
Lal22g0774 655 PANTHER IQ-DOMAIN 5-RELATED 1 395 - -
Lal22g0774 655 MobiDBLite consensus disorder prediction 16 31 - -
Lal22g0774 655 Gene3D - 113 162 - -
Lal22g0774 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 180 IPR027417 -
Lal22g0774 655 Pfam Protein of unknown function (DUF4005) 550 619 IPR025064 -
Lal22g0774 655 SMART iq_5 114 136 IPR000048 GO:0005515
Lal22g0774 655 SMART iq_5 137 158 IPR000048 GO:0005515
Lal22g0774 655 MobiDBLite consensus disorder prediction 267 499 - -
Lal22g0774 655 MobiDBLite consensus disorder prediction 278 293 - -
Lal22g0774 655 ProSiteProfiles IQ motif profile. 137 166 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0774 Lal-Chr22 5612333 5617670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0774 1 635 IQD Protein Family AT2G02790 31.642 2.97e-63 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0774 - - lang:109357279 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0774 22 5612333 5617670 Lal22g0774 22 5612333 5617670 ECH
Lal22g0774 22 5612333 5617670 Lal19g1483 19 17285666 17291737 ECH