Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0773 ATGGGTAACTGCTTAGATTCTTCTGCTAAAGTTGATGCAGCTCATAGCTCTAGAAACACTTCTGCATTAGGAATGTCAAAAACTACTTCTTCAAGCTTATCTATTGCATCATATAGTGAAAAAAGCAATTCCTCAACAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCTAATCTTAAGGCTTTCTCATTCAATGAGCTGAAGAACGCCACGAGAAATTTTCGCCCCGATAGTCTTCTTGGTGAAGGAGGATTTGGTTATGTTTACAAGGGATGGATCGACCAAAACACATTTACAGCCACAAAACCTGGATCGGGAATGGTTGTTGCTGTGAAGAGGCTTAAGCCTGAAGGTTTCCAAGGCCATAAAGAGTGGTTGACTGAGGTTAACTACCTTGGGCAACTGCACCATCGTAATCTGGTTAAATTAATTGGTTACTGCTTGGAGGGAGAGAACCGGCTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAGAATCATCTTTTTAGAAGAGGACCGCAGCCACTCTCTTGGGCAGTGAGGATGAAAGTGGCGATTGGTGCTGCCAGAGGACTCTCTTTTCTTCACAATGCCAAATCACAAGTCATATACCGTGATTTTAAAGCTTCTAACATCCTACTGGATGCTGAGTTCAATGCTAAACTCTCTGATTTTGGCTTAGCTAAGGCGGGTCCTACTGGTGATAGAACTCATGTGTCTACTCAAGTCATGGGTACGCAAGGATATGCAGCACCTGAATATGTGGCAACTGGTCGACTGACGGCTAAAAGTGATGTATACAGCTTTGGAGTTGTGTTGCTTGAACTTTTGTCTGGACGACGTGCTGTTGATAAAACAATGGCTGGTGTGGAGCATAATCTGGTGGACTGGGCAATACCATATTTAGGTGATAAACGGAGACTATTCCGGATCATGGATACAAAGTTGGAGGGTCAATACCCACAAAAAGGAGCCTTCATGGCTGCTACACTTGCTCTACGATGCCTTAATAGGGAAGGCAAGGCAAGGCCTCCAATGACAGAGGTTTTAGCAACACTCGAACAGATAGAAGCCCCGAAAAATGTGGGGCGGAATTCCCAATCAGAACATCAGAGAGGATTCCAGACCCCTGGAAGAAGATCTCCTGCGCCGAATCGGTCTCCAATGCGTCTGACTCCAACTGCATCCCCACTGCTGTCTCACCGGCAATCTGCTCGTGTGCACTAA 1242 0.4541 MGNCLDSSAKVDAAHSSRNTSALGMSKTTSSSLSIASYSEKSNSSTSLPTPRSEGEILSSPNLKAFSFNELKNATRNFRPDSLLGEGGFGYVYKGWIDQNTFTATKPGSGMVVAVKRLKPEGFQGHKEWLTEVNYLGQLHHRNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTMAGVEHNLVDWAIPYLGDKRRLFRIMDTKLEGQYPQKGAFMAATLALRCLNREGKARPPMTEVLATLEQIEAPKNVGRNSQSEHQRGFQTPGRRSPAPNRSPMRLTPTASPLLSHRQSARVH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0773 413 SUPERFAMILY Protein kinase-like (PK-like) 47 358 IPR011009 -
Lal22g0773 413 ProSitePatterns Protein kinases ATP-binding region signature. 84 116 IPR017441 GO:0005524
Lal22g0773 413 MobiDBLite consensus disorder prediction 10 29 - -
Lal22g0773 413 PANTHER OS01G0588500 PROTEIN-RELATED 12 410 - -
Lal22g0773 413 Pfam Protein tyrosine and serine/threonine kinase 82 357 IPR001245 GO:0004672|GO:0006468
Lal22g0773 413 MobiDBLite consensus disorder prediction 364 406 - -
Lal22g0773 413 ProSiteProfiles Protein kinase domain profile. 78 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0773 413 MobiDBLite consensus disorder prediction 362 413 - -
Lal22g0773 413 Gene3D Phosphorylase Kinase; domain 1 54 163 - -
Lal22g0773 413 CDD STKc_IRAK 84 361 - -
Lal22g0773 413 Gene3D Transferase(Phosphotransferase) domain 1 164 382 - -
Lal22g0773 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Lal22g0773 413 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 12 410 - -
Lal22g0773 413 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0773 Lal-Chr22 5592210 5595566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0773 54 358 Glycoside Hydrolase AT3G07070 53.247 1.81e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal22g0773 PK_Tyr_Ser-Thr 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0773 - - gmx:100809778 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0773 22 5592210 5595566 Lal22g0773 22 5592210 5595566 ECH