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Gene search
Sequence information
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100
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal22g0769
ATGTCTAGCAGAAGATCTCGTTCTAGTCAATCTGGTGCTTCAGCTGAGATCACTGATGCTCAAATCACTGATCTCGTTTCCAAGTTACAACAACTTATCCCTGAACTTCGTGCTAGGCGCTCAGACAAGGTTTCATCTGCTAAGGTTTTGCAAGAGACTTGCAACTACATCAAGAACTTGCACAGAGAAGTTGATGATCTAAGTGATCGATTGTCACAACTTTTGGCTAACACAGACTCTAATAGTGCTCAAGCAGCAATTATTAGGAGCATACTAATGTAA
282
0.4113
MSSRRSRSSQSGASAEITDAQITDLVSKLQQLIPELRARRSDKVSSAKVLQETCNYIKNLHREVDDLSDRLSQLLANTDSNSAQAAIIRSILM
93
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal22g0769
93
Coils
Coil
57
77
-
-
Lal22g0769
93
Pfam
Helix-loop-helix DNA-binding domain
21
60
IPR011598
GO:0046983
Lal22g0769
93
Gene3D
-
20
89
IPR036638
GO:0046983
Lal22g0769
93
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
21
82
IPR036638
GO:0046983
Lal22g0769
93
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
6
60
IPR011598
GO:0046983
Lal22g0769
93
PANTHER
TRANSCRIPTION FACTOR PRE6
1
93
-
-
Lal22g0769
93
PANTHER
TRANSCRIPTION FACTOR PRE
1
93
IPR044293
GO:0006355|GO:0040008|GO:0046983
Lal22g0769
93
CDD
bHLH_AtPRE_like
17
77
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal22g0769
Lal-Chr22
5526317
5529125
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal22g0769
1
93
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT3G47710
68.085
3.08e-35
114
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Lal22g0769
HLH
5.2e-06
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal22g0769
-
-
gmx:100816720
161.384
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lal22g0769
22
5526317
5529125
Lal22g0769
22
5526317
5529125
ECH
Lal22g0769
22
5526317
5529125
Lal14g1919
14
18474373
18475557
ECH
Lal22g0769
22
5526317
5529125
Lal12g1447
12
17711612
17713767
ECH
Lal22g0769
22
5526317
5529125
Lal24g1387
24
15272036
15273985
ECH
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