Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0768 ATGTGGATCCGAGGATTCAGTGTTTTGATCAATGGTTGCATTTTGTTGGCTTTAATGTCTCTAATTTCTGCTCTAGAACCCGAATTGGGATCCACCCGCGTCGTCTTTCAGACAAATTATGGGGATATTGAATTTGGTTTCTTTCCAACTGTTGCACCCAAAACTGTTGACCACATTTTTAAGCTTGTGAGACTTGGAGGCTATAACACTAACCATTTCTTTCGGGTGGATAAGGGATTTGTAGCCCAAGTAGCCGATGTTATGGGTGGGAGATCTGCTCCCATGAATGAGGAGCAACGAAAAGAGGCTGGAAAGACCGTTGTTGGTGAATTTAGCAAAGTCAAACATGTCCGGGGTATTCTTTCTATGGGAAGGTACGATGACCCAGACAGTGGTTCGTCGTCATTTTCAATGCTACTTGGAAATGCTCCTCATCTTGATGGCAAGTATGCAATATTTGGAAGAGTTACTAAAGGTGATGATACATTGAAAATGCTTGAGGAACTACCTACCCGTACAGAGGGTATATTTGTAATGCCAACAGAACGCATAACTATCCTGTCTTCTTATTACTATGACACGGAGACAGAAACTTGCGAGCAAGACAGATCGATTTTGAAGCGCAAGCTAGCTGCATCTGCTGTTGAAGTTGAAAGACAGAGGTTGAAATGCTTCCCTTGA 681 0.4273 MWIRGFSVLINGCILLALMSLISALEPELGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVMGGRSAPMNEEQRKEAGKTVVGEFSKVKHVRGILSMGRYDDPDSGSSSFSMLLGNAPHLDGKYAIFGRVTKGDDTLKMLEELPTRTEGIFVMPTERITILSSYYYDTETETCEQDRSILKRKLAASAVEVERQRLKCFP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0768 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 191 IPR002130 GO:0000413|GO:0003755
Lal22g0768 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 14 226 IPR044233 -
Lal22g0768 226 CDD cyclophilin 35 188 - -
Lal22g0768 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Lal22g0768 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Lal22g0768 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Lal22g0768 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Lal22g0768 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 188 IPR002130 GO:0000413|GO:0003755
Lal22g0768 226 SUPERFAMILY Cyclophilin-like 29 193 IPR029000 -
Lal22g0768 226 Gene3D - 23 198 IPR029000 -
Lal22g0768 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 14 226 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0768 34 192 U-box Gene Family AT5G67530 28.313 9.05e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0768 - - gmx:100819238 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0768 22 5516261 5521151 Lal22g0768 22 5516261 5521151 ECH