Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0764 ATGGAATTGGAAGCTGGTCATCAAAATGGGATCCGAAGCAGACCCAATTTCCCTCTTCAGCTCTTAGAGAAAAAAGATGATGATGTTTCATCAGAACAACCATGTTCCACTACCGCACACGACGGTGGTGGTGGCGGAACCGACACCAACAGCAGCCTCAACTATGCTGAACAATCTAAGAAGCCGCCGCCGAAGCGAACCACCACCAAGGACAGGCACACCAAGGTAGACGGCCGTGGCCGCCGGATCCGCATGCCGGCAGCCTGCGCCGCCAGAGTATTCCAGCTGACGCGGGAGCTCGGTCACAAATCTGATGGAGAGACAATCGAGTGGCTCCTCCAGCAGGCGGAGCCTTCCGTGATCGCCGCTACCGGCACCGGCACAATCCCTGCTAACTTCACCTCCCTCAACATCTCCCTCCGAAGCTCCGGCTCCACCGTGTCGGCACCGTCTCACTACTTTCGTGGAAACTACTTCAACCCTAGCACGTTCTCCTCAACCGGCGCCGTGGCTCAGTTAAGGAACCGCGGGGAATGGGAATGGAGCATGAACAACAACAAGAACATGCTCATGGAAGATTCTCGTAGGTCTAACATGTTCCCTGGTTCCTCGGAGAATTGTAATTCCAATATCTCATCACTTTTGAATTTCAACCCTAATGTTAATGCCATGATACAAGCGAAACAAGAAGAATCCGGTGGCGGCGGTGGTAGCCTTGAATTAATGGCTAGTGAGTCTGATGGAAGTTTAGGAAGAAAAAGAAGGCAAGAGCAACAAGAAGTGTCAAATATGGGAAGCTTTATGTTACAATCCAGTACTTCGGGGTCGATTCCGGCAAGCTACGCTTCCAATCCTGCAACGTTTTGGATGGTGGCAGGTAACGCTAACCAAAGCATGAGTAGTGGTGGCAATGGTGGTGATCCCATTTGGGCAATTCCCTCTGTTGGTGGCAATAGTGGAATTTATAGAGGTGCCATGTCAAGTGGTGGTATTCATTTCATGAACTTTGCTTCTCCAATTCCTCTTATGCCTGGTGGTGGACAACTAGGTCCCGGGATGAGCGGTAGTGGCGGTGGTGGTGGTGGTGCTGCAATGGTAAATGAAAGCAACTTGGGTATGCTTGCAACACTTAATGCTTATAGGCAATTTCAAGCCAACGGAGTTCCGGAGTCTCCGGCGAGCACCGGGCAACATCATGGAGGAGATGATGGATATGAAACAAGCAGTCAACATTCCTGA 1239 0.5109 MELEAGHQNGIRSRPNFPLQLLEKKDDDVSSEQPCSTTAHDGGGGGTDTNSSLNYAEQSKKPPPKRTTTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSTVSAPSHYFRGNYFNPSTFSSTGAVAQLRNRGEWEWSMNNNKNMLMEDSRRSNMFPGSSENCNSNISSLLNFNPNVNAMIQAKQEESGGGGGSLELMASESDGSLGRKRRQEQQEVSNMGSFMLQSSTSGSIPASYASNPATFWMVAGNANQSMSSGGNGGDPIWAIPSVGGNSGIYRGAMSSGGIHFMNFASPIPLMPGGGQLGPGMSGSGGGGGGAAMVNESNLGMLATLNAYRQFQANGVPESPASTGQHHGGDDGYETSSQHS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0764 412 Pfam TCP family transcription factor 67 200 IPR017887 -
Lal22g0764 412 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 4 412 - -
Lal22g0764 412 MobiDBLite consensus disorder prediction 230 261 - -
Lal22g0764 412 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 412 IPR005333 GO:0003700
Lal22g0764 412 ProSiteProfiles TCP domain profile. 69 123 IPR017887 -
Lal22g0764 412 MobiDBLite consensus disorder prediction 32 62 - -
Lal22g0764 412 MobiDBLite consensus disorder prediction 1 76 - -
Lal22g0764 412 MobiDBLite consensus disorder prediction 385 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0764 Lal-Chr22 5485358 5486596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0764 59 349 TCP Transcription Factor Family AT3G47620 47.289 3.88e-57 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal22g0764 TCP 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0764 - - var:108335197 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0764 22 5485358 5486596 Lal22g0764 22 5485358 5486596 ECH