Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0756 ATGGACTTGTCTCCAAACAACACCCACACCTTAGACAAAGATACTCAAACCCCACCACCAACCCAACCCACCAACAACACCAAGTCTTCATCTTTCACCAATGGCTCCTTCAAGCCCTACTACCCCACCACCACCACCTCCAACTCCACCTCCTCCACCCCACCACCACCTTCCACGGTGCTACTTTCCTACAATGAGTGCCTTAAAAACCACGCTGCCAGCATAGGCGGCCATGCCCTTGATGGCTGCGGCGAGTTCATGCCTTCCTCTTCCTCAAACCCCTCCCAACCCCGCTCACTAACATGTGCAGCGTGTGGCTGCCACCGCAACTTCCACCGCCGTGACAACAACCCCAGATTCCCCAGCTTTTACCACTCGTCACCGCCACTACCTCACCGTGGACTTAGCCTCAGAACCAGCAGCCCTAGCAGCCTCAGCCCAAGCCCAATATCTTCAAGCCCTTCATCTCCACCACCAATCTCTCATCATTTTCCACCCTCTTATGCAGTACCCCACATGCTCTTATCACATGGAAATGCATATTATGATGATCAACATAGGGGTTTCAGTTTCTTCAACTATTCTTCAGCGTCTAAGTCAGAGAACAAGAATCAAAGCGGGAAGAAGAAGAGGTGCAGAACTAAGTTCAGCCAAGAGCAGAAGGAGAAGATGCATAGTTTATGTGAGAAGTTGGGTTGGAGAATGAACAAAGAGGATGAAGGGTTGATCCAGGAATTTTGCAATGAAGTTGGTATTCCCAGAGGGGTCTTGAAGGTTTGGATGCACAACAATAAGAACGTTTTCAAAAAGAGACCATTACAAATATTGGGAAATGCTGTAAATGATGAAAAGATCAATGGAAATCATAATGGCAATGGTGATGATGGTTGTAGAGGTGGCTTTGATGATAGTGATGATATTAACAATTCCTTAGAACACAACTAA 945 0.4741 MDLSPNNTHTLDKDTQTPPPTQPTNNTKSSSFTNGSFKPYYPTTTTSNSTSSTPPPPSTVLLSYNECLKNHAASIGGHALDGCGEFMPSSSSNPSQPRSLTCAACGCHRNFHRRDNNPRFPSFYHSSPPLPHRGLSLRTSSPSSLSPSPISSSPSSPPPISHHFPPSYAVPHMLLSHGNAYYDDQHRGFSFFNYSSASKSENKNQSGKKKRCRTKFSQEQKEKMHSLCEKLGWRMNKEDEGLIQEFCNEVGIPRGVLKVWMHNNKNVFKKRPLQILGNAVNDEKINGNHNGNGDDGCRGGFDDSDDINNSLEHN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0756 314 MobiDBLite consensus disorder prediction 203 218 - -
Lal22g0756 314 MobiDBLite consensus disorder prediction 197 218 - -
Lal22g0756 314 MobiDBLite consensus disorder prediction 1 57 - -
Lal22g0756 314 MobiDBLite consensus disorder prediction 296 314 - -
Lal22g0756 314 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 20 270 - -
Lal22g0756 314 MobiDBLite consensus disorder prediction 133 150 - -
Lal22g0756 314 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9 20 270 - -
Lal22g0756 314 SUPERFAMILY Homeodomain-like 196 270 IPR009057 -
Lal22g0756 314 MobiDBLite consensus disorder prediction 283 314 - -
Lal22g0756 314 Pfam ZF-HD protein dimerisation region 63 116 IPR006456 -
Lal22g0756 314 Gene3D - 194 269 - -
Lal22g0756 314 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 64 115 IPR006456 -
Lal22g0756 314 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 209 266 IPR006455 -
Lal22g0756 314 MobiDBLite consensus disorder prediction 119 163 - -
Lal22g0756 314 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 64 115 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0756 Lal-Chr22 5412247 5413191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0756 62 265 ZF-HD Transcription Factor Family AT1G69600 50.000 1.66e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lal22g0756 ZF-HD_dimer 4.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0756 - - lang:109355848 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0756 22 5412247 5413191 Lal22g0756 22 5412247 5413191 ECH