Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0745 ATGCAAAACCAAAGTGTGCACTTTGTTCTATCCACTGATGCAAAACCAAGGCTAAAGTGGACTCCTGAACTTCACCAAAGATTCATTGATGCAACCAATAAGCTTGGAGGAGCAGAAAAGGCAACACCAAAGAGTCTTATGAGGCTGATGGGGATTTCAGGACTCACTTTATACCACCTTAAGAGCCATTTACAGGCATTTTCATTTACTGATGAATAG 219 0.411 MQNQSVHFVLSTDAKPRLKWTPELHQRFIDATNKLGGAEKATPKSLMRLMGISGLTLYHLKSHLQAFSFTDE 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0745 72 PANTHER MYB-RELATED PROTEIN 2 7 67 - -
Lal22g0745 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 67 IPR044848 GO:0003700
Lal22g0745 72 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 15 67 IPR006447 GO:0003677
Lal22g0745 72 Pfam Myb-like DNA-binding domain 17 65 IPR001005 -
Lal22g0745 72 SUPERFAMILY Homeodomain-like 14 68 IPR009057 -
Lal22g0745 72 Gene3D - 14 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0745 Lal-Chr22 5343735 5346033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0745 8 67 G2-like Transcription Factor Family AT4G13640 70.000 2.07e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal22g0745 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0745 - - lja:Lj2g3v1277750.1 127.102