Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0744 ATGCATCTATTCTCTTATCTCTATTGGCACACAACATCTGCAAACATTATTGGTTGTCTTCCTCAGTCTCACACAAATGTCCACGACATGAACCTAGTCCAACTTGCTCCCCACTTCCTCTTATCCCAAACTCTAATTCTCAAAAAACCGTTCCAAAACCCTAATTTCATTCCCTCAAAGAACAATTCTCCTCGCCATTCCCAACCTTCATTCGCCCAATTTCCCCATCAACCAACCACCCCCTCCACCGACCGTGGCCTCCTTTTCCGGCAAAAAATTCACTACCTCCAGAATCTTAACGTAAACCCAAAAAAAGCCTTCAAATTAAACCCTAGTCTTCGATCATCCCCCATTTCAATCATCAAATCTGTTGAACAATGCCTCTCATCCATGGGCATCTCACGCTCTGAAATGGGTCGCGTCCTCGACATGCTTCCTGAGCTTCTTACCTTCGATCCCCACAATGATCTCTATCCCATTTTCGATTTCCTCTTAAACGAGGTCGAAATCCCTTATCCCAATATTAAAAAATCGATTTTGCGATGCCCCAGGTTATTGGTTTCCAGTGTTGAACTCCAATTGAGACCCGCCCTCTGTTTTCTGAGGGAATTAGGGTTTGTGGGTCCCCATTCCCTCACGTGCCAGAGCACGTTGCTCTTGGTTTCGAGTGTTGAGGGTACCCTCTTGCCCAAGATTGAGTTTTTGAAGGGTTTGGGGTTCACCTATGTGGAGGTGAAGAACATGGTTGTGAGGTCACCTGGGTTGTTGACTTTTAGCATAGAGAATAATTTGGGACCAAAGGTTGAGTATTTCTTGGAGGAGATGAATGGGAATGTTGTCGAATTGAAGGGGTTTCCGCAGTATTTTTCGTTTAGTCTGGAAAGGAGGATTAAGCCGAGACATAAGATGTTGGTTGAGAATGGATTGCACCTTCCTTTGCGACAAATGTTGAAGGTTAGTGATGGTGGGTTTGAATCCTGGTTGCTTGAAATGAGGTTAAGGAAATTTGAGGGAATGGAGTTTGAGGGAATGGAATAG 1038 0.4451 MHLFSYLYWHTTSANIIGCLPQSHTNVHDMNLVQLAPHFLLSQTLILKKPFQNPNFIPSKNNSPRHSQPSFAQFPHQPTTPSTDRGLLFRQKIHYLQNLNVNPKKAFKLNPSLRSSPISIIKSVEQCLSSMGISRSEMGRVLDMLPELLTFDPHNDLYPIFDFLLNEVEIPYPNIKKSILRCPRLLVSSVELQLRPALCFLRELGFVGPHSLTCQSTLLLVSSVEGTLLPKIEFLKGLGFTYVEVKNMVVRSPGLLTFSIENNLGPKVEYFLEEMNGNVVELKGFPQYFSFSLERRIKPRHKMLVENGLHLPLRQMLKVSDGGFESWLLEMRLRKFEGMEFEGME 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0744 345 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 70 337 - -
Lal22g0744 345 MobiDBLite consensus disorder prediction 56 82 - -
Lal22g0744 345 Gene3D Transcription termination factor 3, mitochondrial 105 340 IPR038538 -
Lal22g0744 345 SMART mt_12 210 241 IPR003690 GO:0003690|GO:0006355
Lal22g0744 345 SMART mt_12 104 134 IPR003690 GO:0003690|GO:0006355
Lal22g0744 345 SMART mt_12 139 171 IPR003690 GO:0003690|GO:0006355
Lal22g0744 345 SMART mt_12 279 310 IPR003690 GO:0003690|GO:0006355
Lal22g0744 345 SMART mt_12 176 207 IPR003690 GO:0003690|GO:0006355
Lal22g0744 345 SMART mt_12 246 278 IPR003690 GO:0003690|GO:0006355
Lal22g0744 345 Pfam mTERF 106 206 IPR003690 GO:0003690|GO:0006355
Lal22g0744 345 Pfam mTERF 219 325 IPR003690 GO:0003690|GO:0006355
Lal22g0744 345 PANTHER CGI-12 PROTEIN-RELATED 70 337 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0744 Lal-Chr22 5329476 5330513 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal22g0744 mTERF 7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0744 K15032 - jre:109009265 366.696