Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0735 ATGGAGGGTAGTTCAAGTTTTGAACTTCCACCTGGTTTCAGGTTCCACCCAACTGATGAAGAATTAATTGTGCACTACCTTTGTAACCAAGCCACATCAAAGCCATGCCCTTCATCTATCATTCCAGAAGTTGATATCTATAAGTTTGATCCATGGGAATTGCCTGATAAAACAAACTTTGGAGAAAATGAATGGTATTTTTTTACCCCAAGGGACAGAAAGTATCCAAATGGGACTAGGCCTAATAGAGCAACAGTTTCAGGGTATTGGAAAGCAACTGGGACAGACAAAGCAATTTATAGTGAATCTAAGCATATTGGGGTCAAGAAAGCCTTGGTTTTTTATAAAGGAAAGCCACCAAAGGGTGTGAAAACAGATTGGATTATGCATGAGTATAGACTCATTGGATCAAGAAGACAAACCAACACACAATTTGGGTCCATGAGGCTGGATGATTGGGTCTTGTGCAGGATCTACAAGAAGAAAAACATGGGGAAATCATTGGAGGAAAAAGAGGAATACCCAATAGTCCAAATCAATGGTGATAACACTGAACATGAAATGCTGAAATTCCCAAGGACTAATTCCCTTGCTCATCTTTTGGATATGGATTACTTGGGTCCAATGTCACAGATATTATATGATGGCTCATATAATTCAACATTTGATTATCAAATTAACACTGCTAATGTTGGATTAGACCACTTTGTAAAACCTCAACTTGTAGAATTCACTAATCCTTATGAAGAAGATTCAGGAAAGTACATAGTGAAAGAGAATAGCACCACCAATAACCCTTACAAATTTGTAAACCAATTGTATGATCAGACAGAACTAAACCAATAA 846 0.3747 MEGSSSFELPPGFRFHPTDEELIVHYLCNQATSKPCPSSIIPEVDIYKFDPWELPDKTNFGENEWYFFTPRDRKYPNGTRPNRATVSGYWKATGTDKAIYSESKHIGVKKALVFYKGKPPKGVKTDWIMHEYRLIGSRRQTNTQFGSMRLDDWVLCRIYKKKNMGKSLEEKEEYPIVQINGDNTEHEMLKFPRTNSLAHLLDMDYLGPMSQILYDGSYNSTFDYQINTANVGLDHFVKPQLVEFTNPYEEDSGKYIVKENSTTNNPYKFVNQLYDQTELNQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0735 281 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 1 233 - -
Lal22g0735 281 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Lal22g0735 281 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Lal22g0735 281 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Lal22g0735 281 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Lal22g0735 281 PANTHER NAC TRANSCRIPTION FACTOR 56 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0735 Lal-Chr22 5270595 5272064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0735 1 212 NAC Transcription Factor Family AT1G69490 66.667 1.84e-109 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal22g0735 NAM 7.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0735 - - gmx:732552 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0735 22 5270595 5272064 Lal22g0735 22 5270595 5272064 ECH