Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0701 ATGTTTTCTATGTCTCTTGGTGGTTCTTTCACATTACCCATGAAGAACAAAATGAGGAAGAGGTTTTTCAATGTTGTAGCTGAAGCTGATGATGATGGTTTTCCTTCTTTTCTTCCTAAGCAAGTTGAGAGAATCCAAGACCCTTTTGCAAGAAAACTTGCTATGCGGATTCAGAGACTACCTTATCTTATCAATTCCATAAGACTCAATCAGGTTAGGTTCACAGAAAATCTCATCATGAGTAGTTGTGTGAAGCCACTGATGCAGAGGAAGGAAACTCCACTTGTTCTTCTGCATGGTTTTGACAGCTCATGTTTAGAATGGAGATATGCATATCCATTGCTTGAGGAATCTGGTTTTGAGACATGGGCTATTGATATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCTTGTGATGTGGTATCAAAGCGTGATCACTTCTATCAGTTTTGGAAGTCCTACATCAAAAGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCTGCTATTGCCATTGACTTTGCTGTCAATTATCCTGAAGCTGTGAAAAAACTTGTTTTGATTGGTGCTAGTGTATATGCAAAAGGAACAGGAAACCTTGCAACCTTGCCTAGAACTGTAGCTTATGCCGGGGTAAATTTGTTGAAGAGCATTCCGTTACGCTTCTATGTCAACTATTTTGCTGCCACCACTAACAAGCCGTTCAGCACCACCCTCGACTGGACTAATGTGGGACGATTGCATTGTTTAATGCCTTGGTGGGATGATGCTACTGTGGATTTTATGACTAGTGGTGGTTACAGTGTTGCTTCCATAATAGGAAAGGTAAAACAGAAAACACTAATAATTTGGGGTGAAAATGATCGCATTATCAGCAATAAGCTTGCAGTGCAACTACACTGTGAATTACCTGATGCAATTATACGCCAAATACCAAATTGTGGCCATCTTCCTCATGTTGAAAGACCAGATTTTGTTGTCAATCTAATTGTTGAATTTGTGCAAAGTCCAAGAGATACCAAGAAATTAAGTCTTTGTCGTTCACAAGTATGA 1062 0.3983 MFSMSLGGSFTLPMKNKMRKRFFNVVAEADDDGFPSFLPKQVERIQDPFARKLAMRIQRLPYLINSIRLNQVRFTENLIMSSCVKPLMQRKETPLVLLHGFDSSCLEWRYAYPLLEESGFETWAIDILGWGFSDLEKLPPCDVVSKRDHFYQFWKSYIKRPMILVGPSLGSAIAIDFAVNYPEAVKKLVLIGASVYAKGTGNLATLPRTVAYAGVNLLKSIPLRFYVNYFAATTNKPFSTTLDWTNVGRLHCLMPWWDDATVDFMTSGGYSVASIIGKVKQKTLIIWGENDRIISNKLAVQLHCELPDAIIRQIPNCGHLPHVERPDFVVNLIVEFVQSPRDTKKLSLCRSQV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0701 353 PANTHER HYDROLASE 9 353 - -
Lal22g0701 353 PRINTS Epoxide hydrolase signature 99 117 IPR000639 GO:0003824
Lal22g0701 353 PRINTS Epoxide hydrolase signature 119 134 IPR000639 GO:0003824
Lal22g0701 353 PRINTS Epoxide hydrolase signature 178 191 IPR000639 GO:0003824
Lal22g0701 353 PRINTS Epoxide hydrolase signature 314 336 IPR000639 GO:0003824
Lal22g0701 353 Pfam Alpha/beta hydrolase family 95 331 IPR000073 -
Lal22g0701 353 Gene3D alpha/beta hydrolase 85 344 IPR029058 -
Lal22g0701 353 PANTHER ALPHA/BETA FOLD HYDROLASE 9 353 - -
Lal22g0701 353 SUPERFAMILY alpha/beta-Hydrolases 93 338 IPR029058 -
Lal22g0701 353 PRINTS Alpha/beta hydrolase fold signature 119 134 IPR000073 -
Lal22g0701 353 PRINTS Alpha/beta hydrolase fold signature 164 177 IPR000073 -
Lal22g0701 353 PRINTS Alpha/beta hydrolase fold signature 178 191 IPR000073 -
Lal22g0701 353 PRINTS Alpha/beta hydrolase fold signature 283 297 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0701 Lal-Chr22 5054690 5058124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0701 94 337 Acyl Lipid Metabolism Gene Families AT3G10840 23.885 8.23e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0701 - - gmx:100792060 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0701 22 5054690 5058124 Lal22g0701 22 5054690 5058124 ECH
Lal22g0701 22 5054690 5058124 Lal6g0796 6 5349363 5355045 LSH
Lal22g0701 22 5054690 5058124 Lal18g0917 18 11976728 11983826 LSH
Lal16g0800 16 5185883 5191695 Lal22g0701 22 5054690 5058124 PCT
Lal22g0701 22 5054690 5058124 Lal16g0800 16 5185883 5191695 PCT