Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0697 ATGATTCATAATCATAAGCAAAATCATCATAATCCCATTTATGTGAAGATGGAGAAAGAGAAGGAGAAATACCCTAGAGATCTGCTTCAAAGATTTAACTTGTCAAGTAGTGGTGGTAGTGAGAGTGATAATCATCACCATCAGCATCAATATCAAAATCAATTTTTTTATCATAATCAGCAAGAACAAGATGAAGTGCTTGGTGAAGAGGATAAGGAAGAAGGGGTTGAATTGAACCTTGGTCTCTCATTAGGTGGAAAATTTGGTGTTGATAAGTATAGTGCTTATAAGAGCAACAAGCTCACTAGGTCCTCTTCTGTTGTGGGGACAATGCCTCTATTTCGTGAGGACGAGGCCACGGTGGCGTCGCCATCACGGATGATGGCGGCGCCACACCCCGTCCTCATGAGGACTTCGTCTCTGCCGGTAGAGACAGAAGATGAGTGGAGGAAGAGGAAGGAGCTCCAGACGCTGCGGCGGATGGAGGCCAAGAGGAGGAGGTCGGAGAAGAGAGGTTCAAAGTCAGAGAGAGAAAGTTCTGCCGGCGGCGGCGGCGGCGGCGGTTTGGAGGAAGTGGAGGGTACAAATGCAGCAGCAACAGTAATGGGGTTGAATAGGTTTGGTGGTGGTTCTTCAAAAGTGGGGCCACCATTTTGGGGAATGGGGGCAAAGCAAGTTGTTCTTGGTGATGTGTTGGGGAAAGGGAAAGTTGATGGTGCTGGTTTTCAAGGATTGTTTGCACAACCATCTTCTCAGGGTTCAATTGATTCCAAAGGTGGAAGTTCATTTTCTGTGCCTGAAATGGAGAGCAAACCTTTTCTAGGATCAAGCAGTTGTGGCGAAGCAAGAAGCCTTGCTAGCAATCAATCGTTACAAGAACGAAGCGGTAAGGATGTCATTGGTTCGTCAAGGACAAAGACAAATGAGAACATGACTAGAGCATCCAGAGCTGCCGAGATGGAGAATCCATCTAAGAGATCACCTCATGCTGCCCAAAATACGGGGAGAGAAATTGGGACAAACTCGGTGGAAGACATGCCTTGTGTATTTACAAAAGGTGACGGTCCTAATGGAAAAAGAATCGAGGGAATCTTATACAAATATGGTAAAGGGGAGGAAGTGAGAATTATGTGTGTATGCCATGGAAACTTCCTCTCTCCAACAGAGTTTGTTAAGCATGCTGGTGGTGGTGACGTAGCTAACCCACTTAGGCACATTGTTATCAATCCTTCTGCTGCTCCCTTTTTGTGA 1251 0.4604 MIHNHKQNHHNPIYVKMEKEKEKYPRDLLQRFNLSSSGGSESDNHHHQHQYQNQFFYHNQQEQDEVLGEEDKEEGVELNLGLSLGGKFGVDKYSAYKSNKLTRSSSVVGTMPLFREDEATVASPSRMMAAPHPVLMRTSSLPVETEDEWRKRKELQTLRRMEAKRRRSEKRGSKSERESSAGGGGGGGLEEVEGTNAAATVMGLNRFGGGSSKVGPPFWGMGAKQVVLGDVLGKGKVDGAGFQGLFAQPSSQGSIDSKGGSSFSVPEMESKPFLGSSSCGEARSLASNQSLQERSGKDVIGSSRTKTNENMTRASRAAEMENPSKRSPHAAQNTGREIGTNSVEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPTEFVKHAGGGDVANPLRHIVINPSAAPFL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0697 416 MobiDBLite consensus disorder prediction 248 341 - -
Lal22g0697 416 Coils Coil 151 178 - -
Lal22g0697 416 MobiDBLite consensus disorder prediction 326 340 - -
Lal22g0697 416 MobiDBLite consensus disorder prediction 138 191 - -
Lal22g0697 416 Pfam Putative nuclear localisation signal 135 270 IPR032310 -
Lal22g0697 416 Pfam Tify domain binding domain 374 408 IPR032308 -
Lal22g0697 416 MobiDBLite consensus disorder prediction 143 177 - -
Lal22g0697 416 PANTHER AFP HOMOLOG 2 22 413 IPR031307 GO:0007165
Lal22g0697 416 MobiDBLite consensus disorder prediction 248 264 - -
Lal22g0697 416 Pfam Ethylene-responsive binding factor-associated repression 71 109 IPR012463 -
Lal22g0697 416 PANTHER NINJA-FAMILY PROTEIN AFP1 22 413 - -
Lal22g0697 416 MobiDBLite consensus disorder prediction 280 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0697 Lal-Chr22 5027863 5032814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0697 - - lang:109340383 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0697 22 5027863 5032814 Lal22g0697 22 5027863 5032814 ECH
Lal22g0697 22 5027863 5032814 Lal6g0787 6 5305470 5309113 LSH