Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0696 ATGAAATTTCCCACGTTGTCTCTCACTGATTCATTCTCTACTATGGTGGAAAACAATAACCAGTGGAAAGCTGAGGAAGCCATTGGTGGCAACACTGAAGCGCTTGAAGCACTCAGAGAACTTATCATATTCCCTCTTCACTACTCTCGCCAAGCTCAAAAGCTTGGCCTTAAATGGCCACGAGGGTTGTTGCTGTACGGTCCACCAGGTACTGGAAAGACAAGTTTGGTACGAGCAGTTGTTCGGGAATGTGGGGCACATTTGACAATTATCAGTCCCCATTCAGTTCATAGAGCACAGGCCGGTGAAAGTGAGAGAATTCTCCGCGAGGCTTTTTCTGATGCTTCATCTCATGTAGCTTTGGGCAAATCATCAGTTATTTTTATAGATGAACTAGATGCACTCTGTCCTCGTCGAGATTCCAAAAGGGAGCAAGATGTTCGAGTTGCCTCCCAACTCTTCACACTAATGGACTCAAATAAACCAACCTCTTCTACACCAGGAGTAGTTGTGGTTGCATCAACTAACAGAGTGGATGCAATTGACCCTGCCCTGAGAAGGTCTGGACGTTTTGATGCTGAAATTGAAGTTACTGTCCCAAATGAAGAGGAGCGCTTTCAAATTCTTAAGTTGTATACAAAGAAGATTCCCCTGGATCTCAGTGTTGACTTGAAAATTGTTGCTGCATCATGTAACGGATATGTTGGAGCTGATTTGGAGGCTTTGTGTCGTGAAGCTACCATGTTTGCAGTTAAAAGGTCCTCCTCAAATACAAAAAAAGATACCAATAATTTTAGTTTAACAATGGAAGATTGGAAGAATGCAAGGTCTGCCGTTGGTCCAAGTATAACAAGAGGTGTTACTGTGGAAATTCCTAAAGTGACCTGGGCAGACATTGGGGGATTACAAGAATTGAAGAAAAAGCTCCAGCAAGCTGTTGAATGGCCTATTAAGCATTCTGCTGCATTTTCAAGATTCGGAATATCCCCTGTACGCGGGATTCTTCTCCATGGGCCGCCAGGATGTTCCAAAACAACCCTTGCCAAAGCTGCTGCACATGCTGCCCAAGCTTCTTTCTTTTCCTTGAGTGGTGCAGAATTGTATTCAATGTATGTTGGAGAAGGGGAAGCTTTGCTTCGTAACACGTTTCAGAGAGCACGCCTTGCAGCACCCAGTATAATATTCTTTGATGAGGCTGATGTGGTAGCTTCCAAACGGGGTGACAGTTCAAGCAATAGTGCTACAGTTGGGGAGAGGCTTTTATCCACTTTGTTGACTGAGATTGATGGGTTAGAAGAAGCTAAAGGAATTCTTGTTTTGGCAGCTACAAATCGCCCTTATGCAATTGATGCTGCACTAATGCGTCCGGGACGATTTGATCTGGTTTTGTATGTGCCACCACCTGATTTGGAGAGTCGATACGAGATACTCTGTGTACATACTCGTAAGATGAAAACAGCGAGTGATGTTGATCTTAGAAGACTAGCAGAAGCTACCGAGCTCTTCACAGGTGCTGAACTGGAGGGATTATGCAGAGAAGCTGGAATTGTAGCTCTAAGGGAAGACATATCTGCTACCTTTGTTTACAACCATCATTTCCAGATTGTGAAGAATTCTTTGAAACCAGCATTAACAGAAGCTGAAATTGAATCATACTCATCTTTTATGAAGACTTCATCTCAAGCTTTGCCTAAGCATTTTGAATCCGGTTCGAAGCCGGTTAGGAACAAAAGCAGAAGGTTTCTTCCTATATCTTTGGTTAAAATCAGTATTGTCAGTTTTGTATTACTTGCTGCTGCTAAATACTATAACTTGCATGGAGATCAAACTGTACTTGGTTTAGTTATGACTTGA 1854 0.4293 MKFPTLSLTDSFSTMVENNNQWKAEEAIGGNTEALEALRELIIFPLHYSRQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTIISPHSVHRAQAGESERILREAFSDASSHVALGKSSVIFIDELDALCPRRDSKREQDVRVASQLFTLMDSNKPTSSTPGVVVVASTNRVDAIDPALRRSGRFDAEIEVTVPNEEERFQILKLYTKKIPLDLSVDLKIVAASCNGYVGADLEALCREATMFAVKRSSSNTKKDTNNFSLTMEDWKNARSAVGPSITRGVTVEIPKVTWADIGGLQELKKKLQQAVEWPIKHSAAFSRFGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRNTFQRARLAAPSIIFFDEADVVASKRGDSSSNSATVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLESRYEILCVHTRKMKTASDVDLRRLAEATELFTGAELEGLCREAGIVALREDISATFVYNHHFQIVKNSLKPALTEAEIESYSSFMKTSSQALPKHFESGSKPVRNKSRRFLPISLVKISIVSFVLLAAAKYYNLHGDQTVLGLVMT 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0696 617 CDD AAA 29 197 - -
Lal22g0696 617 PANTHER AAA-FAMILY ATPASE 32 540 - -
Lal22g0696 617 PANTHER AAA-FAMILY ATPASE 22 85 - -
Lal22g0696 617 Gene3D - 10 200 IPR027417 -
Lal22g0696 617 Gene3D - 284 468 IPR027417 -
Lal22g0696 617 Pfam AAA+ lid domain 489 534 IPR041569 -
Lal22g0696 617 Pfam AAA+ lid domain 221 258 IPR041569 -
Lal22g0696 617 ProSitePatterns AAA-protein family signature. 437 455 IPR003960 GO:0005524|GO:0016887
Lal22g0696 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 292 526 IPR027417 -
Lal22g0696 617 Gene3D - 201 283 - -
Lal22g0696 617 Pfam ATPase family associated with various cellular activities (AAA) 334 466 IPR003959 GO:0005524|GO:0016887
Lal22g0696 617 Pfam ATPase family associated with various cellular activities (AAA) 63 197 IPR003959 GO:0005524|GO:0016887
Lal22g0696 617 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 32 540 - -
Lal22g0696 617 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 22 85 - -
Lal22g0696 617 SMART AAA_5 330 469 IPR003593 -
Lal22g0696 617 SMART AAA_5 59 201 IPR003593 -
Lal22g0696 617 CDD AAA 300 467 - -
Lal22g0696 617 Gene3D - 469 560 - -
Lal22g0696 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 282 IPR027417 -
Lal22g0696 617 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 67 86 - -
Lal22g0696 617 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 415 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0696 Lal-Chr22 5007660 5017504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0696 259 579 Calmodulin-binding Proteins AT3G56690 44.136 7.41e-83 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0696 - - gmx:100814288 993.801