Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0685 ATGGCGGAAGCATCACACAAACCCGTTCCTCTATTGAAAGACGAGCTCGATATCGTGATACCCACGATTCGAAACCTCGATTTCTTAGAGATGTGGAGGCCATTCTTTCAGCCTTACCATCTCATCATCGTTCAGGACGGTGACCCTTCTAAGGTCATTAAGGTTCCTGAAGGTTTTGATTATGAACTCTATAATCGTAATGATATTAACCGGATCTTGGGTCCTAAGGCTTCATGCATCTCTTTCAAGGACTCTGCTTGTCGCTGTTTTGGGTATATGGTGTCTAAGAAGAAGTACATCTACACCATCGATGATGATTGCTTTGTTGCTAAAGATCCATCTGGCCATGATATCAATGCACTTGAGCAGCACATTAAGAATCTCCTAAGTTCATCCACTCCATATTTCTTCAACACCCTTTATGATCCTTACAGAGAAGGTGCCGATTTCGTCCGTGGATATCCCTTCAGCCTTCGTGAGGGTGTCCCGACTGCTGTTTCTCATGGACTTTGGCTCAACATACCTGATTATGATGCTCCAACACAGCTTGTCAAGCCCCGTGAGAGGAACACCAGGTATGTCGATGCTGTTTTGACCATTCCCAAGGGAACATTGTTCCCCATGTGTGGTATGAATCTGGCCTTCGACCGTGAGCTGATTGGACCTGCAATGTACTTCGGCCTCATGGGTGATGGTCAGCCCATTGGACGATACGACGATATGTGGGCCGGCTGGTGTGTTAAGGTTATCACTGACCATTTGGGATTGGGAGTCAAGACTGGTCTTCCATACATTTGGCACAGCAAAGCAAGCAACCCATTTGTTAACCTGAAAAAGGAGTACAAAGGTATCTTCTGGCAAGAAGATATCATTCCATTCTTCCAAAATGTCACCCTTCCAAAGGATTGCACCTCTGTTCAGAAATGCTACATTGAACTCTCCAAGCAAGTCAAGGAGAAACTCGGCCCGATCGATCCGTATTTCACCAAACTAGCAGATGCCATGGTCACTTGGATTGAAGCTTGGGATGAGCTTAACACCCCATCTGAATAA 1053 0.4568 MAEASHKPVPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGHDINALEQHIKNLLSSSTPYFFNTLYDPYREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVITDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNVTLPKDCTSVQKCYIELSKQVKEKLGPIDPYFTKLADAMVTWIEAWDELNTPSE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0685 350 Pfam Reversibly glycosylated polypeptide 12 346 IPR037595 -
Lal22g0685 350 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 223 IPR029044 -
Lal22g0685 350 PIRSF UPTG 6 350 IPR004901 GO:0016866|GO:0071669
Lal22g0685 350 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 3 349 - -
Lal22g0685 350 PANTHER UDP-ARABINOSE MUTASE 3 349 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0685 Lal-Chr22 4876432 4878809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0685 K13379 - sly:101253371 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0685 22 4876432 4878809 Lal22g0685 22 4876432 4878809 ECH
Lal22g0685 22 4876432 4878809 Lal12g1397 12 17058079 17061579 ECH
Lal22g0685 22 4876432 4878809 Lal13g1755 13 17099348 17101914 ECH
Lal22g0685 22 4876432 4878809 Lal6g0776 6 5210526 5213926 LSH
Lal22g0685 22 4876432 4878809 Lal18g0937 18 12196915 12200319 LSH