Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0667 ATGAGAGCCGGCAAAGGGAACGTGGAAGAGGAAGAGTACGAGGAAGATGAGTTCGGTTCTTCTAAGAAACAAGCCCCTTCCTCTGTCCCTAACACCAATAAAGATGCAAAAGCTGTTGACAAGGCTAGTGCAATAAGATCAAAACATTCAGTAACTGAGCAGCGAAGAAGGAGCAAGATAAACGAGAGGTTCCAGATATTAAGGGATCTCATACCTCAATGTGATCAAAAGAGGGACACAGCATCATTCTTATTAGAGGTGATTGAATATGTTCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGCTCATATCCTGGTTGGAGCCCTGAGCCCTCGAAATTAATGCCATGGGTAGTCATCTTAATGGCACAGAGAAACAGTCACTGGCGTGTACAAAACTTTGCTGGTCAACCTCAACTGGTAAAGAATGGTTCAGGTCCGGTATCGCCTTTTCCTGGAAAGCTTGACGAAAGCAACACTAGTATCTCTCCAACCATGCCTTGTGGCAGCCAGAATATGATAGATCCTGATCAGAGCAGGGATATTGCCAGCAAAATAACAGAGACACAGCCCGATTTGGCTAGCAAGGGAGTGCCTATACCCATGGCTGTGCATTCAAACATGCCAGTTCCTGTCAGAAGTGATGGTGTAATTGCACATCCTCTCAACGGAATTGTTTCTGATGCACAATCAATTGAATACCCGGCCACCAGTGAACCACAGACCCAGCAGGAGGAACTGACAGTTGAAGGAGGGACAATTAGCATCTCTAGTGTATATTCCCAAGGTTGTGTACCATTATGGAGAAGAAAAGTCAAGCTGGAACCTTCTTCATCTTGGCTAACTGGAGTAAGAGATTGGGGCTTTCTTCATCTTGGTGGGGCCTCACTTTTTAAACGGAAAATGGAAACATACCAGGACTACAAGTTGCTGAATAATCTGACTCAAGCGCTACAGAGTGCTGGTATAGATTTGTCACAGGCTAGCATCTCAGTTCAGATTAATCTTGGGAAGCGAGCAAAGGAAGGACCGAGCTGTGGAACCTCTTCTCCCAAGAATCATGATAACACCCCTTCTAGAAACCATGCAAATGCACATTTTAGAGATGCAGGCAGTGCAGAAGACTCAGATCAAGCTCAAAAAAGAATGAAAACAACTTATAAGTGA 1170 0.4444 MRAGKGNVEEEEYEEDEFGSSKKQAPSSVPNTNKDAKAVDKASAIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYPGWSPEPSKLMPWVVILMAQRNSHWRVQNFAGQPQLVKNGSGPVSPFPGKLDESNTSISPTMPCGSQNMIDPDQSRDIASKITETQPDLASKGVPIPMAVHSNMPVPVRSDGVIAHPLNGIVSDAQSIEYPATSEPQTQQEELTVEGGTISISSVYSQGCVPLWRRKVKLEPSSSWLTGVRDWGFLHLGGASLFKRKMETYQDYKLLNNLTQALQSAGIDLSQASISVQINLGKRAKEGPSCGTSSPKNHDNTPSRNHANAHFRDAGSAEDSDQAQKRMKTTYK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0667 389 MobiDBLite consensus disorder prediction 39 57 - -
Lal22g0667 389 Pfam Helix-loop-helix DNA-binding domain 46 95 IPR011598 GO:0046983
Lal22g0667 389 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 44 94 IPR011598 GO:0046983
Lal22g0667 389 MobiDBLite consensus disorder prediction 1 57 - -
Lal22g0667 389 PANTHER TRANSCRIPTION FACTOR BIM2 310 386 - -
Lal22g0667 389 PANTHER TRANSCRIPTION FACTOR BIM2 1 265 - -
Lal22g0667 389 SMART finulus 50 100 IPR011598 GO:0046983
Lal22g0667 389 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 310 386 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lal22g0667 389 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 265 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lal22g0667 389 MobiDBLite consensus disorder prediction 360 383 - -
Lal22g0667 389 MobiDBLite consensus disorder prediction 340 389 - -
Lal22g0667 389 Gene3D - 41 107 IPR036638 GO:0046983
Lal22g0667 389 CDD bHLH_AtBIM_like 43 118 - -
Lal22g0667 389 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 42 115 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0667 Lal-Chr22 4727281 4732295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0667 1 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 46.667 4.03e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal22g0667 HLH 3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0667 - - lang:109361152 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0667 22 4727281 4732295 Lal22g0667 22 4727281 4732295 ECH
Lal22g0667 22 4727281 4732295 Lal6g0757 6 5059236 5070021 LSH