Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0659 ATGAGTGAAAAAGAAAATTTTGAGCTTAATAGAAACCAGGATCCTATGAGTTATTCAACTGGTATGAATTTGGATTGGAGATTTGGGGGTGCAAATCCTCCAAATTCATCTGTGGATTTGGTTTCCATGGGGAATTCTGTTAATGTTAGCAGAGTGGATCTTATTGGTTCTTCTTCATGTTCCTCTGCCTCAATGGTGGATTCATTTGGTCCAAACTTTTGGGATCACCCACCCAATTCCCAAAATATGGGGTTTTGTGACATTAATGCCCATAACAATGGGAGCTCTTCAAACACAATTGGAATTAGAAGAGATGGTCATGCTCATGGAGCAGCACTTGAAATGGGTTGGAACATGGCTAACCCTATGTTGAAGGGGGATGGTTTTATACCAAATGGGCCAGGGATGTTTCCCCGGGGTTTATCTCAGTTTCCAACCGACTCTGGATTTATTGAGCGGGCTGCGAGGTTCTCATGCTTTGGAGGAGGGAATTTTGGTGAAATGGTTAACTCATATGTGGTTCCACAATCCGTCGGTCTTTATGCTGAGACTGGTGGTGGTACAATGAATGGAACAAGAAATGCTTTTGCAGGCAATGGATTAAAATCAGCCCCTGGAGGACAATCTCAAGAGAACAATCTGAATGTGGTTGAAGCTGCAAAAGATTTGTTTCCATCTGTTGAGCAGCAACTGGCTACTAAAGGAAGCCCACTGAAGAATGATAAAAGATGCGAAAGTCGTGCTATATGTCAAGATGAAGGGAAACAAGCTCTTGACATGCCTGCTGATGAGTCTGATAGAGCTGAATCTAGTGATGATGGTGGTGGTGGTAATGATGATGACGATGGCGATGGCCATGGGCAAGATGATTCCCCAATGTTGGAGGGTACTAGTGGGGAACCTTCTATTAAAGGACTAAACTCAAAGAAAAGGAAAAGTGGGCAGGATGCTGATAATGATGAAGGCAATGCAGCTCCAAAACTACTTGGCGAAGGTGCAAAGGACAACCCTGCGAGTCCACAGAAGAGAGGCCAACAACCAACTTCAACAACGAAGGCTTCTGGGAAGAATGCCAAACAAGGGTCTCAAGCTTCTGATCCACCCAAGGAGGAATACATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAATAGCCACAGTCTTGCAGAGAGAGTAAGGAGGGAAAAGATAAGTGAGAGGATGAAGTTCCTTCAAGACCTTGTACCTGGATGCAGCAAGGTCACTGGCAAGGCAGTTATGTTAGATGAAATCATTAACTATGTACAGTCACTTCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCACGGCTGGATTTTAATGTTGAAGCACTTCTTGCTAAAGATATTCTTCACCAGCGGCCTAGTCTTTCATCTGCCCTGGGATTTCCTCTAGAAATGTCTATGGCTTACCCTCAATTACATCCATCTCAACCAGGACTTATTCAGTCAACTCTTCCTAGCATGGGAAATACATCCGGTATCCTTCGTAGAACCATTCACCCACAGTTGGCACCCTTAAGTGGCGGGTTCAAAGAGCCAAATCAGGTGCCTGATGGGTGGGAGGATGAGCTTCACAATGTTGTACAGATGAACTTTTCACCAATGAGCTTTGCACCATCTGCACCCTTGAACAGCGAAGATGTGGATGGTAATGTACCAGCAAATAAGATGAAAGTTGAACTTTGA 1722 0.4419 MSEKENFELNRNQDPMSYSTGMNLDWRFGGANPPNSSVDLVSMGNSVNVSRVDLIGSSSCSSASMVDSFGPNFWDHPPNSQNMGFCDINAHNNGSSSNTIGIRRDGHAHGAALEMGWNMANPMLKGDGFIPNGPGMFPRGLSQFPTDSGFIERAARFSCFGGGNFGEMVNSYVVPQSVGLYAETGGGTMNGTRNAFAGNGLKSAPGGQSQENNLNVVEAAKDLFPSVEQQLATKGSPLKNDKRCESRAICQDEGKQALDMPADESDRAESSDDGGGGNDDDDGDGHGQDDSPMLEGTSGEPSIKGLNSKKRKSGQDADNDEGNAAPKLLGEGAKDNPASPQKRGQQPTSTTKASGKNAKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNVEALLAKDILHQRPSLSSALGFPLEMSMAYPQLHPSQPGLIQSTLPSMGNTSGILRRTIHPQLAPLSGGFKEPNQVPDGWEDELHNVVQMNFSPMSFAPSAPLNSEDVDGNVPANKMKVEL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0659 573 PANTHER BHLH TRANSCRIPTION FACTOR 10 572 - -
Lal22g0659 573 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 379 450 IPR036638 GO:0046983
Lal22g0659 573 Gene3D - 378 452 IPR036638 GO:0046983
Lal22g0659 573 MobiDBLite consensus disorder prediction 339 364 - -
Lal22g0659 573 CDD bHLH_AtBPE_like 371 456 - -
Lal22g0659 573 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 10 572 IPR024097 GO:0006355
Lal22g0659 573 SMART finulus 387 437 IPR011598 GO:0046983
Lal22g0659 573 MobiDBLite consensus disorder prediction 252 369 - -
Lal22g0659 573 Pfam Helix-loop-helix DNA-binding domain 384 432 IPR011598 GO:0046983
Lal22g0659 573 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 381 431 IPR011598 GO:0046983
Lal22g0659 573 MobiDBLite consensus disorder prediction 252 274 - -
Lal22g0659 573 MobiDBLite consensus disorder prediction 553 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0659 Lal-Chr22 4683533 4691351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0659 56 544 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 45.639 4.41e-116 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal22g0659 HLH 7.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0659 - - lang:109340340 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0659 22 4683533 4691351 Lal22g0659 22 4683533 4691351 ECH